Post-estimation results manipulation: Stata vs. R

January 26, 2011
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Stata's new "margins" command is as powerful as "Zelig" package for R for the purpose of conducting post-estimation manipulation of the results (e.g. producing predicted probabilities, confidence intervals, etc.). While "margins" uses delta method, "Ze...

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Zurich, March 9, 2011 – Rmetrics Presentation at ZurichR User Group

January 25, 2011
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(This article was first published on Rmetrics blogs, and kindly contributed to R-bloggers) To leave a comment for the author, please follow the link and comment on his blog: Rmetrics blogs. R-bloggers.com offers daily e-mail updates about R news and tutorials on topics such as: visualization (ggplot2, Boxplots, maps, animation), programming (RStudio, Sweave, LaTeX, SQL, Eclipse, git, hadoop, Web...

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Zurich, March 9, 2011 – Rmetrics Presentation at ZurichR User Group

January 25, 2011
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(This article was first published on Rmetrics blogs, and kindly contributed to R-bloggers) To leave a comment for the author, please follow the link and comment on his blog: Rmetrics blogs. R-bloggers.com offers daily e-mail updates about R news and tutorials on topics such as: visualization (ggplot2, Boxplots, maps, animation), programming (RStudio, Sweave, LaTeX, SQL, Eclipse, git, hadoop, Web...

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A new sponsorship program for local R user groups

January 25, 2011
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Over the past year, Revolution Analytics has sponsored a number of local R user groups, and we've been thrilled to see the enthusiasm with which R users are coming together. This year, we decided to expand and formalize our sponsorship program, so that any local R user group, whether just starting up or already established, can benefit from additional...

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Null Confusion

January 25, 2011
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Null Confusion

Talking a bit with my friend Jarrod about math stats and econometrics, we both came to the conclusion that the standard presentation for basic inference is lacking. In an intro or intermediate applied statistics course you learn about first and … Continue reading →

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sab-R-metrics: Intermediate Scatter Plots

January 25, 2011
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sab-R-metrics: Intermediate Scatter Plots

First off, I'll say it's been a whirlwind of a past few days. Thanks to David Smith at the Revolutions Blog for his kind words about the sab-R-metrics series and link back this way. Add in Ed Kupfer's posts at the APBRmetrics board, Harry Pavlidis at THT, Dave Allen at Fangraphs...

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sab-R-metrics: Intermediate Scatter Plots

January 25, 2011
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sab-R-metrics: Intermediate Scatter Plots

First off, I'll say it's been a whirlwind of a past few days. Thanks to David Smith at the Revolutions Blog for his kind words about the sab-R-metrics series and link back this way. Add in Ed Kupfer's posts at the APBRmetrics board, Harry Pavlidis at THT, Dave Allen at Fangraphs...

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CPU and GPU trends over time

January 25, 2011
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CPU and GPU trends over time

GPUs seem to be all the rage these days. At the last Bayesian Valencia meeting, Chris Holmes gave a nice talk on how GPUs could be leveraged for statistical computing. Recently Christian Robert arXived a paper with parallel computing firmly in mind. In two weeks time I’m giving an internal seminar on using GPUs for

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January 26, 2011 – Portfolio Webinar about Portfolio Design, Optimization and Stability Analysis

January 25, 2011
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(This article was first published on Rmetrics blogs, and kindly contributed to R-bloggers) To leave a comment for the author, please follow the link and comment on his blog: Rmetrics blogs. R-bloggers.com offers daily e-mail updates about R news and tutorials on topics such as: visualization (ggplot2, Boxplots, maps, animation), programming (RStudio, Sweave, LaTeX, SQL, Eclipse, git, hadoop, Web...

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January 26, 2011 – Portfolio Webinar about Portfolio Design, Optimization and Stability Analysis

January 25, 2011
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(This article was first published on Rmetrics blogs, and kindly contributed to R-bloggers) To leave a comment for the author, please follow the link and comment on his blog: Rmetrics blogs. R-bloggers.com offers daily e-mail updates about R news and tutorials on topics such as: visualization (ggplot2, Boxplots, maps, animation), programming (RStudio, Sweave, LaTeX, SQL, Eclipse, git, hadoop, Web...

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Automatic pdf generation and versioning with odfWeave

January 25, 2011
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odfWeave is a great tool for your reproducible research workflow, using R to produce reproducible OpenOffice reports. But a few pieces are lacking. – It is a bit of a drag, every time you want to make a pdf, to have to find and open your output document and click on the pdf button. –

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Automatic pdf generation and versioning with odfWeave

January 25, 2011
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odfWeave is a great tool for your reproducible research workflow, using R to produce reproducible OpenOffice reports. But a few pieces are lacking. – It is a bit of a drag, every time you want to make a pdf, to have to find and open yo...

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Estimate Probability and Quantile

January 25, 2011
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Simple root finding and one dimensional integrals algorithms were implemented in previous posts. These algorithms can be used to estimate the cumulative probabilities and quantiles. Here, take normal distribution as an example. Read More: 281 Words Totally

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Estimate Probability and Quantile

January 25, 2011
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Simple root finding and one dimensional integrals algorithms were implemented in previous posts. These algorithms can be used to estimate the cumulative probabilities and quantiles. Here, take normal distribution as an example. Read More: 281 Words Totally

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Listening for trends in US baby names over 130 years

January 25, 2011
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Listening for trends in US baby names over 130 years

What happens when you mash together R‘s data crunching magic, Festival‘s speech synthesis power, and the audio wonders of the venerable music language Csound? You fall even more in love with free and open-source software, and you start hearing sounds like this: A single beat of the above sound represents the top 1000 baby names

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Climate Time Series In a Single CSV File: Update 1

January 24, 2011
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Climate Time Series In a Single CSV File: Update 1

I am pleased to announce my CTS.csv file which includes 18 climate monthly time series in one easy to access csv file. This is part of  my goal of having a user friendly way for do-it-yourself citizen climate scientists to … Continue reading →

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A twitter feed for new R packages

January 24, 2011
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Want to keep up-to-date on the latest R packages released to CRAN? Dirk Eddelbuettel's CRANberries service now tweets the release of new R packages to @CRANberriesFeed, so all you need to do is follow that user on Twitter. R hackers may also be interested to see how this Twitter feed was implemented -- in R, of course. Dirk has...

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Review of “R Graphs Cookbook” by Hrishi Mittal

January 24, 2011
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Review of “R Graphs Cookbook” by Hrishi Mittal

Executive summary: Extremely useful for new users, informative to even quite seasoned users. Refereeing Once upon a time a publisher asked if I would referee a book (unspecified) about R.  In an instance that can only be described as psychotic I said yes.  That bit of insanity turned out to be a good thing. I … Continue reading...

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Trends in partisanship by state

January 24, 2011
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Matthew Yglesias discusses how West Virginia used to be a Democratic state but is now solidly Republican. I thought it would be helpful to expand this to look at trends since 1948 (rather than just 1988) and all 50 states...

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Merge Me Baby One More Time!

January 24, 2011
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OK – has this ever happened to you? You are working with a team of collaborators all using a common dataset – maybe from an Agency, and LTER, or someone else’s data altogether. Each of you has some task – incorporating new data, running fancy models and putting the results back into the data for

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Example 8.22: latent class modeling using randomLCA

January 24, 2011
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Example 8.22: latent class modeling using randomLCA

In Example 8.21 we described how to fit a latent class model to data from the HELP dataset using SAS and R. Subjects were classified based on their observed (manifest) status on the following variables (on street or in shelter in past 180 days [homele...

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Pattern Matching for Transcription Factor Binding Sites

January 24, 2011
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I'm trying to search for binding sites for the transcription factor MAF (i.e. TFBS for MAF) in the promoter regions of various genes. I initially started out looking at a precomputed database of binding sites MAPPER. However the TFBS models that have ...

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R Tutorial Series: One-Way ANOVA with Pairwise Comparisons

January 24, 2011
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R Tutorial Series: One-Way ANOVA with Pairwise Comparisons

When we have more than two groups in a one-way ANOVA, we typically want to statistically assess the differences between each group. Whereas a one-way omnibus ANOVA assesses whether a significant difference exists at all amongst the groups, pairwise com...

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R Tutorial Series: One-Way ANOVA with Pairwise Comparisons

January 24, 2011
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R Tutorial Series: One-Way ANOVA with Pairwise Comparisons

When we have more than two groups in a one-way ANOVA, we typically want to statistically assess the differences between each group. Whereas a one-way omnibus ANOVA assesses whether a significant difference exists at all amongst the groups, pairwise com...

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Hello world!

January 24, 2011
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Hello world!

I suppose that “Hello World” is the first thing that any blogger should do when starts a blog. So here I go “HELLO WORLD!!!” The aim of this blog is to gather my thoughts and experience around learning R and hopefully to get a lot of insights from my readers. Officially this is my third attempt

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Paying interest and the number e

January 24, 2011
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Paying interest and the number e

Suppose I borrow a dollar from you and I’ll pay you 100% interest at the end of the year.  How much money will you have then? $1 * (1 + 1) = $2 What happens if instead the interest is calculated as  50% twice in the year? $1 * (1.5 * 1.5) = $2.25 After … Continue reading...

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Using RClimate To Retrieve Climate Series Data

January 23, 2011
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Using RClimate To Retrieve Climate Series Data

This post shows how to use RClimate.txt to retrieve a climate time series and write a csv file in 5 lines of R script. One of my readers, Robert, wants to be able to download climate time series data and … Continue reading →

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Using R for Introductory Statistics, Chapter 5

January 23, 2011
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Using R for Introductory Statistics, Chapter 5

Any good stats book has to cover a bit of basic probability. That's the purpose of Chapter 5 of Using R for Introductory Statistics, starting with a few definitions: Random variable A random number drawn from a population. A random variable is a variable for which we define a range of possible values and...

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Using R for Introductory Statistics, Chapter 5

January 23, 2011
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Using R for Introductory Statistics, Chapter 5

Any good stats book has to cover a bit of basic probability. That's the purpose of Chapter 5 of Using R for Introductory Statistics, starting with a few definitions: Random variable A random number drawn from a population. A random variable is ...

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