Monthly Archives: August 2011

SNA: Visualising an email box with R

August 10, 2011
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SNA: Visualising an email box with R

Are statistics sexy? Visualising social networks certainly is! I wrote a little function, which makes producing beautiful plots depicting a mailbox with R an extremely easy task. I find visualisations of ‘social graphs’ particularly appealing. They look like flowers. I … Continue reading →

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Dump MySQL to CSV using R

August 10, 2011
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Based on a related post on one of my favorite python-lists I remembered, that I wrote a similar snipplet some time ago. So if you want to dump your whole MySQL database to csv-files you can recycle the following code: ?Download mysql2cvs.R1 2 3 4 5 6 7 8 9 require(RMySQL) m<-MySQL() summary(m) con<-dbConnect(m, dbname

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Using the google prediction API from R

August 10, 2011
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Using the google prediction API from R

Google has a "black box" prediction API that they provide for use with creating recommender systems or filtering spam. Furthermore, they provide an R package for interfacing that API, but try as I might I cannot get it to work under windows. Here are ...

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Plotting molecular properties for (sub)sets

August 10, 2011
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Plotting molecular properties for (sub)sets

For a toxicology paper we are writing up, I need to create a few plots showing how the toxic and non-toxic molecules differ (or not) with respect to a few molecular properties, such as logP or the molecular weight. The rcdk package provides all, of cou...

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A 60-second survey for R users

August 10, 2011
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I'm doing a little research to validate estimates of the size of the R user community. If you're an R user, please take a minute to complete this three-question survey on R usage at your organization. Thanks in advance. Revolution Analytics: R user base survey

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Informational Easing: A Change In F.O.M.C. Expectations

August 10, 2011
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Informational Easing: A Change In F.O.M.C. Expectations

Let's analyze the latest FOMC policy move.The FOMC met yesterday and changed up the communications strategy.  How so? Well, until yesterday the statement has been saying as of June 22, 2011:"The Committee continues to anticipat...

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Scraping web data in R

August 10, 2011
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Scraping web data in R

In my last post, I went through a lot of effort to scrape the PMI index off the ISM website.  It turns out that was unnecessary effort, as commentator "senne" pointed out that this index is available from FRED, with the symbol NAPM. &nbs...

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Using a “pure infographic” to explore differences between information visualization and statistical graphics

August 10, 2011
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Using a “pure infographic” to explore differences between information visualization and statistical graphics

Our discussion on data visualization continues. One one side are three statisticians–Antony Unwin, Kaiser Fung, and myself. We have been writing about the different goals served by information visualization and statistical graphics. On the other side are graphics experts (sorry for the imprecision, I don’t know exactly what these people do in their day jobs The post Using...

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Multiple cores in R, revisited

August 10, 2011
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The bigmemory package in combination with doMC provides at least a partial solution for sharing a large data set across multiple cores in R. With this solution you can work on the same matrix using several threads. It is also a very scalable solution. ...

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Coding, GUIs and Statistical Rituals

August 10, 2011
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Coding, GUIs and Statistical Rituals

I was recently inspired to comment on this blog post, asking is R is a cure for ‘mindless statistics’. Anyone whose familiar with statistics used in applied fields like epidemiology, sociology, social sciences generally will be familiar with the idea of a ‘statistical ritual’. Rather than think about the proper statistical approach to every question,

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