February 2020

Calculate all the CVs of all the QC Levels of all the Methods of all the Instruments at all the Sites all at once … with Sunquest LIS and dplyr

February 4, 2020 | [email protected]

Background As part of our lab accreditation requirements, we have to provide measurement uncertianty estimates for all tests at all hospital sites. As you might imagine, with thousands of testcodes in Sunquest LIS, getting all the coefficients of variation (CVs) represents a daunting task for the quality technologist to accomplish. ...
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LP and Tidy Data Principles (Part 1)

February 3, 2020 | Pachá

Motivation The Life Changing Magic of Tidying Text is one of those post I keep re-reading from time to time and I wanted to try the analysis with songs. I shall use lp package, a small data package I had for experimental purposes. Note: If some images appear too small ...
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LP and Tidy Data Principles (Part 1)

February 3, 2020 | Pachá

Motivation The Life Changing Magic of Tidying Text is one of those post I keep re-reading from time to time and I wanted to try the analysis with songs. I shall use lp package, a small data package I had for experimental purposes. Note: If some images appear too small ...
[Read more...]

Some lessons from rstudio::conf

February 3, 2020 | kaijagahm

Today I’m departing a little from the problem/context/solution format of these posts to share some things I learned from last week’s rstudio::conf. When I started in R a few years ago, I never thought I would have any place at a coding conference for computer ...
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Grid point occurrence records onto a raster

February 3, 2020 | A.M. Barbosa

The ‘gridRecords‘ function, which has just been added to the ‘fuzzySim‘ package (from version 2.6 on), takes a raster stack and a set of spatial coordinates of a species’ presence (and optionally absence) records, and returns a data frame with … Continue reading →
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Conference feelings: from newbie to sponsor

February 2, 2020 | Fellgernon Bit - rstats

In the summer of 2008, nearly 12 years ago, I attended my first R/Bioconductor conference: BioC2008. Just last week I went to my second rstudio::conf(2020) which I greatly enjoyed. After some tweets exchanges today, I started reflecting on my journey and wanted to share my thoughts. Why I like going ... [Read more...]

Working with audio in R using av

February 2, 2020 | rOpenSci - open tools for open science

The latest version of the rOpenSci av package includes some useful new tools for working with audio data. We have added functions for reading, cutting, converting, transforming, and plotting audio data in any popular audio / video format (mp3, mkv, aac, etc). The functionality can either be used by itself, or ...
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The palindrome of 02.02.2020

February 2, 2020 | tomaztsql

As of writing this blog-post, today is February 2nd, 2020. Or as I would say it, 2nd of February, 2020. There is nothing magical about it, it is just a sequence of numbers. On a boring Sunday evening, what could…Read more ›
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R Tip: Check What Repos You are Using

February 2, 2020 | John Mount

In a lot of our R writing we casually say “install from CRAN using install.packages('PKGNAME')” or “update your packages by using update.packages(ask = FALSE, checkBuilt = TRUE) (and answering ‘no’ to all questions about compiling).” We recently became aware that for some users this isn’t complete advice. ... [Read more...]

Prison Admissions in New York 2008 – 2018

February 2, 2020 | Richard Choi

Who are in our prisons? According to a study conducted by the Bureau of Justice Statistics in 2016, the United States has a prison population of approximately 2.2 million people, firmly cementing the United States as the nation with the highest incarceration rate in the world. To provide some context as to ...
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Primitive Functions List

February 1, 2020 | Random R Ramblings

Ever wondered which R functions are actually passed to internal C code? Well, wonder no more as it turns out there is an unexported named list within the methods package providing instructions for turning builtin and special functions into generic functions. Wrapping this list with names() gives us the list ... [Read more...]

Get and Set List Elements with magrittr

February 1, 2020 | Random R Ramblings

Introduction Did you know that the magrittr pipe, %__%, can be used for more than just data.frames and tibbles? In this blog post, we look at how we can create get and set functions for list elements. Getting List Elements First, let’s create a simple list.
z1 <- list(a = pi, b = 2.718, c = 0.57721)
z1
# $a
# [1] 3.141593
# 
# $b
# [1] 2.718
# 
# $c
# [1] 0.57721
Let’s ... [Read more...]

A guide to encoding categorical features using R

February 1, 2020 | Anindya Mozumdar

In this article, we will look at various options for encoding categorical features. We will also present R code for each of the encoding techniques. Categorical feature encoding is an important data processing step required for using these features in many statistical modelling and machine learning algorithms. The material in ... [Read more...]

Monsters

February 1, 2020 | @aschinchon

Ooh, see the fire is sweepin’Our very street todayBurns like a red coal carpetMad bull lost its way(Gimme Shelter, The Rolling Stones) After following this easy tutorial, you will be able to create tiled images from a photograph. You may want to use your own portrait or some ...
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