Posts Tagged ‘ rblogs ’

Early August flotsam

August 5, 2012
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Early August flotsam

Back teaching a couple of subjects and it’s the constant challenge to find enough common ground with students so one can push/pull them to the other side of new concepts. We are not talking about complex hierarchical models using mixed … Continue reading →

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Split-plot 2: let’s throw in some spatial effects

July 30, 2012
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Split-plot 2: let’s throw in some spatial effects

Disappeared for a while collecting frequent flyer points. In the process I ‘discovered’ that I live in the middle of nowhere, as it took me 36 hours to reach my conference destination (Estoril, Portugal) through Christchurch, Sydney, Bangkok, Dubai, Madrid … Continue reading →

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Split-plot 1: How does a linear mixed model look like?

June 24, 2012
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Split-plot 1: How does a linear mixed model look like?

I like statistics and I struggle with statistics. Often times I get frustrated when I don’t understand and I really struggled to make sense of Krushke’s Bayesian analysis of a split-plot, particularly because ‘it didn’t look like’ a split-plot to … Continue reading →

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Review: “Forest Analytics with R: an introduction”

May 29, 2012
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Review: “Forest Analytics with R: an introduction”

Forestry is the province of variability. From a spatial point of view this variability ranges from within-tree variation (e.g. modeling wood properties) to billions of trees growing in millions of hectares (e.g. forest inventory). From a temporal point of view … Continue reading →

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End of May flotsam

May 28, 2012
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End of May flotsam

The end is near! At least the semester is coming to an end, so students have crazy expectations like getting marks back for assignments, and administrators want to see exam scripts. Sigh! What has been happening meanwhile in Quantum Forest? … Continue reading →

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R’s increasing popularity. Should we care?

May 17, 2012
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R’s increasing popularity. Should we care?

Some people will say ‘you have to learn R if you want to get a job doing statistics/data science’. I say bullshit, you have to learn statistics and learn to work in a variety of languages if you want to … Continue reading →

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Bivariate linear mixed models using ASReml-R with multiple cores

May 7, 2012
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Bivariate linear mixed models using ASReml-R with multiple cores

A while ago I wanted to run a quantitative genetic analysis where the performance of genotypes in each site was considered as a different trait. If you think about it, with 70 sites and thousands of genotypes one is trying … Continue reading →

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Teaching code, production code, benchmarks and new languages

April 30, 2012
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Teaching code, production code, benchmarks and new languages

I’m a bit obsessive with words. May be I should have used learning in the title, rather than teaching code. Or perhaps remembering code. You know? Code where one actually has very clear idea of what is going on; for … Continue reading →

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Late-April flotsam

April 25, 2012
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Late-April flotsam

It has been month and a half since I compiled a list of statistical/programming internet flotsam and jetsam. Via Lambda The Ultimate: Evaluating the Design of the R Language: Objects and Functions For Data Analysis (PDF). A very detailed evaluation … Continue reading →

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R, Julia and genome wide selection

April 24, 2012
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R, Julia and genome wide selection

— “You are a pussy” emailed my friend. — “Sensu cat?” I replied. — “No. Sensu chicken” blurbed my now ex-friend. What was this about? He read my post on R, Julia and the shiny new thing, which prompted him … Continue reading →

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