361 search results for "sweave"

Welcome to Blogistic Reflections! (A blog created entirely in Emacs org-mode)

September 19, 2009
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Welcome to Blogistic Reflections! (A blog created entirely in Emacs org-mode)

John Tukey’s preface to Exploratory Data Analysis begins with a useful rule, “It is important to understand what you can do before you learn to measure how well you seem to have done it.” When I decided I wanted to start a blog concentrating on statistics, R, and Emacs, I thought I had better learn

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Standardized Velvet Assembly Report

August 25, 2009
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Standardized Velvet Assembly Report

http://code.google.com/p/standardized-velvet-assembly-report/I finally got my Velvet Assembler report script up on google code. This "program" consists of some short scripts and a Sweave report designed to help Velvet users identify the optimal kmer an...

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Standardized Velvet Assembly Report

August 25, 2009
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Standardized Velvet Assembly Report

http://code.google.com/p/standardized-velvet-assembly-report/I finally got my Velvet Assembler report script up on google code. This "program" consists of some short scripts and a Sweave report designed to help Velvet users identify the optimal kmer an...

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R: Function to create tables in LaTex or Lyx to display regression model results

June 19, 2009
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R: Function to create tables in LaTex or Lyx to display regression model results

Most people using LaTex feel that creating tables is no fun. Some days ago I stumbled across a neat function written by Paul Johnson that produces LaTex code as well as LaTex code that can be used within Lyx. The output can be used for regression models and looks like output from the Stata outreg

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Workflow with Python and R

March 6, 2009
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Workflow with Python and R

I seem to be doing more and more with Python for work over and above using it as a generic scripting language. R has been my workhorse for analysis for a long time (15+ years in various incarnations of S+ and R), but it still has some deficiencies. I’m finding Python easier and faster to

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Absolutely great resource

February 25, 2009
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A very nice resource which helped me a lot in kickstarting my Sweave efforts is Learning to Sweave in APA Style by clementi on scribd. This is a down to earth tutorial containing a lot of good tips! See for yourself:Learning to Sweave in APA Style ...

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Absolutely great resource

February 25, 2009
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A very nice resource which helped me a lot in kickstarting my Sweave efforts is Learning to Sweave in APA Style by clementi on scribd. This is a down to earth tutorial containing a lot of good tips! See for yourself:Learning to Sweave in APA Style ...

Read more »

Setting up Textmate to use R

November 21, 2008
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Setting up Textmate to use R

After becoming frustrated using the StatET plugin for Eclipse on my Mac (sometimes the R console would start and sometimes not), I decided to use Textmate instead. Textmate allows you to install extra bundles which are plug-ins to add some new function...

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Setting up Textmate to use R

November 21, 2008
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Setting up Textmate to use R

After becoming frustrated using the StatET plugin for Eclipse on my Mac (sometimes the R console would start and sometimes not), I decided to use Textmate instead. Textmate allows you to install extra bundles which are plug-ins to add some new function...

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Paper describing the weaver package published in Computational Statistics

June 14, 2008
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It seems like a lifetime ago that I developed the weaver package for caching code chunks in Sweave documents. The paper that I presented at the DSC 2007 has finally been published in Computational Statistics. The title is Caching Code Chunks in Dynam...

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