296 search results for "ANOVA"

Analysing a randomised complete block design with vegan

November 3, 2014
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Analysing a randomised complete block design with vegan

It has been a long time coming. Vegan now has in-built, native ability to use restricted permutation designs when testing effects in constrained ordinations and in range of other methods. This new-found functionality comes courtesy of Jari (mainly) and my efforts to have vegan permutation routines use the permute package. Jari also cooked up a standard interface...

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Type III tests and R

October 28, 2014
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by Terry M. Therneau Ph.D. Faculty, Mayo Clinic About a year ago there was a query about how to do "type 3" tests for a Cox model on the R help list, which someone wanted because SAS does it. The SAS addition looked suspicious to me, but as the author of the survival package I thought I should understand...

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New Course! A hands-on introduction to statistics with R by A. Conway (Princeton University)

October 13, 2014
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New Course! A hands-on introduction to statistics with R by A. Conway (Princeton University)

The best way to learn is at your own pace. Combining the interactive R learning environment of DataCamp and the expertise of Prof. Conway of Princeton, we offer you an extensive online course on introductory statistics with R.  Start learning now… Whether you are a professional using statistics in your job, an academic wanting a

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Get Some Class

October 13, 2014
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Get Some Class

By Chris Campbell – Senior Consultant, UK. R is a classy language. Look: x <- matrix(1:9, nrow = 3) x ## ## 1 4 7 ## 2 5 8 ## 3 6 9 class(x) ## … Continue reading →

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Newcastle R course, a write-up

September 22, 2014
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I recently attended a week-long R course in Newcastle, taught by Colin Gillespie. It went from “An Introduction to R” to “Advanced Graphics” via a day each on modelling, efficiency and programming. Suffice to say it was an intense 5 days! Overall it was the best R course I’ve been on so far. I’d recommend it to others,...

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An exercise in non-linear modeling

September 7, 2014
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An exercise in non-linear modeling

In my previous post I wrote about the importance of age and why it is a good idea to try avoiding modeling it as a linear variable. In this post I will go through multiple options for (1) modeling non-linear effects in a linear regression setting, (2) benchmark the methods on a real dataset, and (3) look at how...

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Keep your team informed with “slackr”

September 5, 2014
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Keep your team informed with “slackr”

Karl Broman did a spiffy job summarizing a good number of the options available to R folk if they want to get notifications from R. You can also generate OS X notifications as well. If you’re using Slack for team coordination and communications, you’ve got a new option - slackr that also enables you...

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An adverse consequence of fitting "maximal" linear mixed models

August 23, 2014
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An adverse consequence of fitting "maximal" linear mixed models

Distribution of intercept-slope correlation estimates with 37 subjects, 15 itemsDistribution of intercept-slope correlation estimates with 50 subjects, 30 itemsShould one always fit a full variance covariance matrix (a "maximal" model) when one analyze...

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What your twitter friends say about you and your interests

August 10, 2014
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What your twitter friends say about you and your interests

This post is first in a series that looks at the inferences you can make using social media data. The …Continue reading →

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Guns are Cool – Differences between states

August 3, 2014
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Guns are Cool – Differences between states

Last week my blog showed that there are differences between states in the shootingtracker database. This week it is attempted to understand why states are different. A number of variables were extracted from a few sources, among which gun laws, % ...

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