March 2010

InformationWeek on Urlocker

March 5, 2010 | David Smith

InformationWeek published today a profile of Zack Urlocker, the former MySQL executive who recently joined REvolution's board: Former MySQL staffer Zack Urlocker is going to try to do for predictive analytics what he once did for relational database systems: bring open source code to a user population that hasn't necessarily ... [Read more...]

GLMM revisted

March 5, 2010 | Shige

A short while ago, I reported some discrepancies between the results produced by "lme4" and other R packages as well as Stata. Today I upgraded to the most recent version of "lme4a" and re-ran my model. The error of false convergence disappea...
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R amusements

March 5, 2010 | Abhijit

On a lark, and to kill a bit of time, I was running the R fortune command looking for references to SAS. Here’s what two successive random fortunes turned up. Can there be two more antipodal opinions about the same product? I laughed out loud. __ fortune(‘SAS’) There are ... [Read more...]

Getting data from an image (introductory post)

March 5, 2010 | Timothée

Hi there! This blog will be dedicated to data visualization in R. Why? Two reasons. First, when it comes to statistics, I am always starting by some exploratory analyses, mostly with plots. And when I handle large quantities of data, it’s nice to make some graphs to get a ... [Read more...]

An email about mixtures

March 4, 2010 | xi'an

As a coincidence, or not, I received the following email just before starting our mixture estimation workshop (the above is Ben Nevis on Monday, whose skyline really looks like a three component mixture!) and giving a discussion on label switching: I am implementing a Markov-Chain Monte Carlo method for Gibbs ... [Read more...]

Yet Another plyr Example

March 4, 2010 | dylan

another plyr example quantiles (0.05, 0.25, 0.5, 0.75, 0.95) of DSC by temperature bin There are plenty of good examples on how to use functions from the plyr package. Here is one more, demonstrating how to use ddply with a custom function. Note that there are two places where the example function may blow up ...
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New Le Monde puzzle

March 3, 2010 | xi'an

When I first read Le Monde puzzle this weekend, I though it was even less exciting than the previous one: find and , such that is a multiple of . The solution is obtained by brute-force checking through an R program: and then the a next solution is (with several values for ... [Read more...]

Quality trimming in R using ShortRead and Biostrings

March 3, 2010 | Jeremy Leipzig

I wrote an R function to do soft-trimming, right clipping FastQ reads based on quality.This function has the option of leaving out sequences trimmed to extinction and will do left-side fixed trimming as well.#softTrim#trim first position lower than minQuality and all subsequent positions#omit sequences that after ... [Read more...]

Intelligent Enterprise: You Can Predict that R Will Succeed

March 3, 2010 | David Smith

Analyst David Stodder at Intelligent Enterprise also noted the activity around R at the recent Predictive Analytics World conference in San Francisco, and he reviews his impressions in a column today. In fact, he attributes the increasing prominence of predictive analytics to R: Possibly the most important factor influencing the ... [Read more...]

Augmented support for complex survey designs in R

March 3, 2010 | Nick Horton

We'll get back to code examples later this week, but wanted to let you know about an R package with updated functionality in the meantime.The appropriate analysis of sample surveys requires incorporation of complex design features, including stratification, clustering, weights, and finite population correction. These can be address in ...
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Analyzing Google’s Winter Olympics Search Traffic with R

March 2, 2010 | David Smith

The Official Google Blog today includes an analysis of Google's search traffic related to the recently-concluded Winter Olympics, correlating various high-profile events with searches from particular countries. For example, traffic from the United States shows the expected diurnal cycle but with promintent peaks for the opening ceremony and the hockey ... [Read more...]

MySQL alum Zack Urlocker join’s REvolution’s board

March 2, 2010 | David Smith

As you might have heard from this morning's press release, we've just welcomed a new member to REvolution's board of directors: Zack Urlocker. Zack has an impeccable open-source pedigree: until recently, he was responsible for engineering and marketing at MySQL, the wildly successful open-source database company recently acquired by Oracle (... [Read more...]

ACM Data Mining Camp, March 20

March 2, 2010 | David Smith

Following last year's successful unconference on data mining, the Bay Area Association for Computing Machinery (ACM) will again host the 2010 ACM Data Mining Camp on March 20 in San Jose, CA. The event is free and runs from 11:15am - 7:30pm, with an optional 2-hour pre-camp training in the morning. (REvolution ... [Read more...]
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