University life

AMIS on-line!

February 15, 2012 | xi'an

After many delays and exchanges of emails, our AMIS paper with Jean-Marie Cornuet, Jean-Michel Marin and Antonietta Mira eventually made it into the Scandinavian Journal of Statistics. I am quite glad it is now published as it will publicize the method... [Read more...]

recents advances in Monte Carlo Methods

February 8, 2012 | xi'an

Next Thursday (Jan. 16), at the RSS, there will be a special half-day meeting (afternoon, starting at 13:30) on Recent Advances in Monte Carlo Methods organised by the General Application Section. The speakers are Richard Everitt, University of Oxford, Missing data, and what to do about it Anthony Lee, Warwick University, Auxiliary ... [Read more...]

updated slides for ABC PhD course

February 7, 2012 | xi'an

Over the weekend, I have added a few slides referring to recent papers mentioning the convergence of ABC algorithms, in particular the very relevant paper by Dean et al. I had already discussed in an earlier post. (This is taking a larger chunk of my time than expected! I am ... [Read more...]

speed of R, C, &tc.

February 2, 2012 | xi'an

My Paris colleague (and fellow-runner) Aurélien Garivier has produced an interesting comparison of 4 (or 6 if you consider scilab and octave as different from matlab) computer languages in terms of speed for producing the MLE in a hidden Markov model, using EM and the Baum-Welch algorithms. His conclusions are that ... [Read more...]

tenured research position with ABC skills!

February 2, 2012 | xi'an

I just received this announcement for the opening of a (tenured/civil servant) position in the national research institute in biostatistics, genetics, and agronomy, INRA: Position opening with profile Approximate inference techniques in complex systems Key activities and required skills: You will develop methodological research in the field of statistical ... [Read more...]

the birthday problem [X’idated]

February 1, 2012 | xi'an

The birthday problem (i.e. looking at the distribution of the birthdates in a group of n persons, assuming [wrongly] a uniform distribution of the calendar dates of those birthdates) is always a source of puzzlement [for me]! For instance, here is a recent post on Cross Validated: I have 360 ... [Read more...]

ultimate R recursion

January 31, 2012 | xi'an

One of my students wrote the following code for his R exam, trying to do accept-reject simulation (of a Rayleigh distribution) and constant approximation at the same time: which I find remarkable if alas doomed to fail! I wonder if there exists a (real as opposed to fantasy) computer language ... [Read more...]

the Art of R Programming [guest post]

January 30, 2012 | xi'an

(This post is the preliminary version of a book review by Alessandra Iacobucci, to appear in CHANCE. Enjoy [both the review and the book]!) As Rob J. Hyndman enthusiastically declares in his blog, “this is a gem of a book”. I would go even further and argue that The Art ... [Read more...]

ABC [PhD] course

January 25, 2012 | xi'an

As mentioned in the latest post on ABC, I am giving a short doctoral course on ABC methods and convergence at CREST next week. I have now made a preliminary collection of my slides (plus a few from Jean-Michel Marin’s), available on slideshare (as ABC in Roma, because I ... [Read more...]

non-stationary AR(10)

January 18, 2012 | xi'an

In the revision of Bayesian Core on which Jean-Michel Marin and I worked together most of last week, having missed our CIRM break last summer (!), we have now included an illustration of what happens to an AR(p) time series when the customary stationarity+causality condition on the roots of ... [Read more...]

Harmonic means, again again

January 9, 2012 | xi'an

Another arXiv posting I had had no time to comment is Nial Friel’s and Jason Wyse’s “Estimating the model evidence: a review“. This is a review in the spirit of two of our papers, “Importance sampling methods for Bayesian discrimination between embedded models” with Jean-Michel Marin (published in ... [Read more...]

1500th, 3000th, &tc

January 7, 2012 | xi'an

As the ‘Og reached its 1500th post and 3000th comment at exactly the same time, a wee and only mildly interesting Sunday morning foray in what was posted so far and attracted the most attention (using the statistics provided by wordpress). The most visited posts: Title Views Home page 203,727 In{... [Read more...]

Example 7.17 in Introduction to Monte Carlo methods with R

January 4, 2012 | xi'an

I received the following email about Introducing Monte Carlo Methods with R a few days ago: Hallo Dr. Robert, I  am studying your fine book for myself. There´s a little problem in examples 7.17 and 8.1: in the R code a function “gu” is used and a reference given to ex. 5.17, ... [Read more...]

2012, Turing year

January 3, 2012 | xi'an

Buying the special issue of La Recherche on “La révolution des mathématiques”, I discovered that this is the Alan Turing Year in celebration of the 100th anniversary of Turing‘s birth. The math department at the University of Leeds has a webpage on all the events connected with ... [Read more...]

Le Monde puzzle [#754]

December 25, 2011 | xi'an

The pre-X’mas puzzle in Le Monde weekend edition is about “magical numbers” having as digits all digits between 0 and n (at least once) and being multiple of all digits between 1 and (n+1). Easy, isn’t it?! I thought so while driving down to the Alps on Saturday and (on ... [Read more...]

semi-automatic ABC

December 17, 2011 | xi'an

The talk of Wednesday afternoon Ordinary Meeting of the Royal Statistical Society went on quite well, I think. I would have expected a few people (in general) and some specific people (in particular) but this being the last week of term the schedule was not the best of times. Paul ... [Read more...]

Bayesian inference and the parametric bootstrap

December 15, 2011 | xi'an

This paper by Brad Efron came to my knowledge when I was looking for references on Bayesian bootstrap to answer a Cross Validated question. After reading it more thoroughly, “Bayesian inference and the parametric bootstrap” puzzles me, which most certainly means I have missed the main point. Indeed, the paper ... [Read more...]

quantum forest

December 1, 2011 | xi'an

Thanks to a link on R-bloggers, I was introduced to Luis Apiolaza’s blog, Quantum Forest, which covers data analyses and R comments he encounters in his research as a quantitative forester/geneticist. And he works at the University of Canterbury, Christchurch, where I first taught from Bayesian Core in 2006. ... [Read more...]

mean of an absolute Student’s t

November 30, 2011 | xi'an

Having (rather foolishly) involved myself into providing an answer for Cross Validated: “Can the standard deviation of non-negative data exceed the mean?“, I ended up having to derive the mean of the absolute value of a Student’s variate X.  (Well, not really, but then I did.) I think the ... [Read more...]

bounded normal mean

November 24, 2011 | xi'an

A few days ago, one of my students, Jacopo Primavera (from La Sapienza, Roma) presented his “reading the classic” paper, namely the terrific bounded normal mean paper by my friends George Casella and Bill Strawderman (1981, Annals of Statistics). Even though I knew this paper quite well, having read (and studied) ... [Read more...]
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