I couldn't find any functions to calculate number of polytomies, and related metrics. Here's a simple function that gives four metrics on a phylo tree object: Here's output from the gist above: ` dat $trsize [1] 15 $numpolys [1] 1 $numpolysbyt...

Recology used to be hosted on Blogger, and my personal website was hosted on Wordpress. Neither platform was very satisfying. Blogger is very limited in their layouts, unless you use dynamic views, which suck because they don't allow javascript snipp...

So my advisor pointed out this 'new' (well, 2004), way of plotting results of logistic regression results. The idea was presented in a 2004 Bulletin of the Ecological Society of America issue (here). I tried to come up with a solution using, what el...

Does this work on twitterfeed?

Test post on new Jekyll hosted website...

Sorry for the temporary loss of GitHub gists...Hopefully dynamic views will support javascript soon!!

http://www.surveygizmo.com/s3/722753/Mendeley-PLoS-Binary-Battle-Public-Vote