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Use RStudio Server in a Virtual Environment with Docker in Minutes!

March 25, 2019
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Use RStudio Server in a Virtual Environment with Docker in Minutes!

A fundamental aspect of the reproducible research framework is that (statistical) analysis can be reproduced; that is, given a set of instructions (or a script file) the exact results can be achieved by another analyst with the same raw data. This idea may seem intuitive, but in practice it can be difficult to achieve in … Continue reading Use...

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Deploying an R Shiny App With Docker

February 8, 2019
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If you haven’t heard of Docker, it is a system that allows projects to be split into discrete units (i.e. containers) that each operate within their own virtual environment. Each container has a blueprint written in its Dockerfile that describes all of the operating parameters including operating system and package dependencies/requirements. Docker images are easily … Continue reading Deploying...

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Automating R-markdown Tables With Hooks

January 15, 2019
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Automating R-markdown Tables With Hooks

KableExtra was chosen as the primary way to format tabulated data in the HTML R markdown templates used at Telethon Kids Institute, see the Biometrics R package and this article. I like the tables produced by kableExtra: they look tidy and the package has a feature that highlights table rows that the pointer is hovering over. Moreover, it is … Continue reading Automating...

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