2382 search results for "twitter"

Friday Links: R, OpenHelix Bioinformatics Tips, 23andMe, Perl, Python, Next-Gen Sequencing

August 5, 2011
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Friday Links: R, OpenHelix Bioinformatics Tips, 23andMe, Perl, Python, Next-Gen Sequencing

I haven't posted much here recently, but here is a roundup of a few of the links I've shared on Twitter (@genetics_blog) over the last two weeks.Here is a nice tutorial on accessing high-throughput public data (from NCBI) using R and Bioconductor.Cloud...

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CHCN: Canadian Historical Climate Network

August 4, 2011
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CHCN: Canadian Historical Climate Network

A reader asked a question about data from   environment canada.  He wanted to know if that data could somehow be integrated into the RGhcnV3 package.  That turned out to be a bit more challenging that I expected.  In short order I’d found a couple other people who had done something similar.  DrJ of course was

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Data Driven Story Discovery: Working Up a Multi-Layered Chart

August 3, 2011
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Data Driven Story Discovery: Working Up a Multi-Layered Chart

How many different dimensions (or “columns” in a dataset where each row represents a different sample and each column a different measurement taken as part of that sample) can you plot on a chart? Two are obvious: X and Y values, which are ideal for representing continuous numerical variables. If you’re plotting points, as in

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Merging Two Different Datasets Containing a Common Column With R and R-Studio

August 2, 2011
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Merging Two Different Datasets Containing a Common Column With R and R-Studio

Another way for the database challenged (such as myself!) for merging two datasets that share at least one common column… This recipe using the cross-platform stats analysis package, R. I use R via the R-Studio client, which provides an IDE wrapper around the R environment. So for example, here’s how to merge a couple of

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JSM 2011 [3]

August 2, 2011
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JSM 2011 [3]

Monday August 01 was the first full day of JSM 2011 and full is the appropriate word to describe the day! It started for me at 7am with a round table run by Marc Suchard on parallel computing (or at 3am if I am considering the time I woke up!). I was rather out of

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On not going viral

August 1, 2011
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On not going viral

This week the reader is directed to Messy Matters to read up on research conducted by Sharad Goel, Duncan Watts and Dan Goldstein in which they hunted for traces of "viral" diffusion on Twitter, Facebook, Yahoo!, and beyond. The results run counter to mainstream intuition.

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CRU Data in RghcnV3

July 31, 2011
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CRU Data in RghcnV3

As many have noted CRU have posted their data a bit ago and the usual gang has started to put it through the various “engines” for calculating a global temperature index. Thanks to others who worked this problem ahead of me getting the data in Rghcnv3 was not that hard, but it was not without

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Welcome to rOpenSci

July 31, 2011
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rOpenSci is a collaborative effort to develop R-based tools for facilitating Open Science. So what is Open Science?  Open science is the practice of making various elements of scientific research — data & methods, code & software, and results & publications — readily accessible to anyone. While this has great potential for advancing research (in

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Getting My Eye In Around F1 Quali Data – Parallel Coordinate Plots, Sort of…

July 30, 2011
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Getting My Eye In Around F1 Quali Data – Parallel Coordinate Plots, Sort of…

Looking over the sector times from the qualifying session for tomorrow’s Hungarian Grand Prix, I noticed that Vettel was only fastest in one of the sectors. Whilst looking for an easy way of shaping an R data frame so that I could plot categorical values sector1, sector2, sector3 on the x-axis, and then a line

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hacking .gov shortened links

July 30, 2011
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hacking .gov shortened links

This past Friday, the web portal to the US Federal government, USA.gov, organized hackathons across the US for programmers and data scientists to work with and analyze the data from their link-shortening service. It turns out that if you shorten a web link with bit.ly, the shortened link looks like 1.usa.gov/V6NpL (that one goes to

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