2808 search results for "gis"

Beautiful network diagrams with ggplot2

December 21, 2012
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Beautiful network diagrams with ggplot2

I don’t usually like describing my own work as “beautiful,” but with your permission I will make an exception today. There have been some requests for scripts illustrating the plotting of network diagrams with ggplot2, and today (for the winter solstice) we’re bringing you a really nice-looking way of doing just that. In fact, this Gist...

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Stealing from the internet: Part 1

December 20, 2012
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Stealing from the internet: Part 1

Well, not stealing but rather some handy tools for data mining… About a year ago I came across the package XML as I was struggling to get some data from various web pages. The purpose of this blog is to describe how this package can be used to quickly gather data from the internet. I’ll

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Turnovers are poison

December 20, 2012
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Turnovers are poison

This is probably a slightly useless post, but a bit of fun all the same. If nothing else, it allows me to take a stab at learning a bit more about logistic regression. I’m still trying to unravel the mystery of why the Bears lost to the Vikings two weeks ago. This mystery is compounded

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Geocoding location data with dismo

December 20, 2012
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Geocoding location data with dismo

Today’s Gist could actually end up being very useful to a number of you. It’s something of a trumped-up example, but it illustrates in very simple code how to do three interesting things: Gather Tweets by search term (which we’ve done before), and look up user info for each of the users returned by that search. Convert textual user...

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Finding Numeric Values of Strings using strsplit()

December 19, 2012
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Finding Numeric Values of Strings using strsplit()

Given a random list of words, can you find which has the lowest or highest numerical value when we apply a basic number:letter cipher?  A while back I asked David how he would solve this problem:  http://projecteuler.net/problem=42 Today’s post shows how to take a vector of words, parse them into each of the individual letters comprising the word, and...

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R in Insurance Conference, London, 15 July 2013

December 19, 2012
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R in Insurance Conference, London, 15 July 2013

The first conference on R in Insurance will be held on Monday 15 July 2013 at Cass Business School in London, UK. The intended audience of the conference includes both academics and practitioners who are active or interested in the applications of R in insurance.This one-day conference will focus on applications in insurance...

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Making Friends with Multicollinearity

December 18, 2012
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Not every system of independent variables can be decomposed into separate components, each with its own unique contribution.  Sometimes our individual variables behave “as a unit” and thus become so entangled that we cannot say where the effect of one variable begins and the effect of another variable ends.  In such cases, it might be best to ignore the ...

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Making prettier network graphs with sna and igraph

December 18, 2012
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Making prettier network graphs with sna and igraph

We’ve had some requests for ideas about how to make prettier network graphs, so here is one example, using the sna package for plotting, and the igraph package to calculate PageRank. The help file for gplot is pretty self-explanatory, but Melissa Clarkson has produced the most thorough and impressive guide for any R...

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Differential Isoform Expression With RNA-Seq: Are We Really There Yet?

December 17, 2012
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Differential Isoform Expression With RNA-Seq: Are We Really There Yet?

In case you missed it, a new paper was published in Nature Biotechnology on a method for detecting isoform-level differential expression with RNA-seq Data:Trapnell, Cole, et al. "Differential analysis of gene regulation at transcript resolution with RN...

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Who are the pollinators? (with R plot)

December 17, 2012
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Who are the pollinators? (with R plot)

I’ve been dreaming on writing a manuscript about who are the pollinators for a while, but it looks I’m not going to have the time soon, so here is an early draft of what the main figure should look like: It’s surprisingly … Continue reading →

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