2751 search results for "GIS"

What is Correctness for Statistical Software?

December 14, 2012
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What is Correctness for Statistical Software?

Introduction A few months ago, Drew Conway and I gave a webcast that tried to teach people about the basic principles behind linear and logistic regression. To illustrate logistic regression, we worked through a series of progressively more complex spam detection problems. The simplest data set we used was the following: This data set has

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Everything is a Network, featuring the sna package

December 14, 2012
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Everything is a Network, featuring the sna package

We’ve gotten some requests, through the Ask us anything page, to do some plotting of networks. We may come back to this later, but today’s Gist shows how you can plot pretty much literally anything as a network. First, we go back to our

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Mapping GPS Tracks in R

December 13, 2012
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Mapping GPS Tracks in R

This is an explanation of how I used R to combine all my GPS cycling tracks from my Garmin Forerunner 305.Converting to CSVYou can convert pretty much any GPS data to .csv by using GPSBabel. For importing directly from my Garmin, I used the comman...

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Fuzzy clustering with fanny()

December 13, 2012
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Fuzzy clustering with fanny()

This is kind of a fun example, and you might find the fuzzy clustering technique useful, as I have, for exploratory data analysis. In this Gist, I use the unparalleled breakfast dataset from the smacof package, derive dissimilarities from breakfast it...

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Is invasive?

December 13, 2012
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Is invasive?

The Global Invasive Species Database (GISD) (see their website for more info here) has data on the invasiveness status of many species. From taxize you can now query the GISD database. Introducing the function gisd_isinvasive. This function was contributed to taxize by Ignasi Bartomeus, a postdoc at the Swedish University Agricultural Sciences. There are two possible outputs from using...

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Is invasive?

December 13, 2012
By
Is invasive?

The Global Invasive Species Database (GISD) (see their website for more info here) has data on the invasiveness status of many species. From taxize you can now query the GISD database. Introducing the function gisd_isinvasive. This function was contributed to taxize by Ignasi Bartomeus, a postdoc at the Swedish University Agricultural Sciences. There are two possible outputs from using...

Read more »

Multidimensional metric unfolding with SMACOF

December 12, 2012
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Multidimensional metric unfolding with SMACOF

SMACOF stands for “Scaling by MAjorizing a COmplicated Function,” and it is a multidimensional scaling algorithm for metric unfolding of, among other things, rectangular ratings matrices. One neat Political Science application of MDS is i...

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Multidimensional scaling of REM album covers: FlagSpace revisited

December 11, 2012
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Multidimensional scaling of REM album covers: FlagSpace revisited

By way of following up on an old in-joke, and doing something constructive because I couldn’t get to sleep, I thought I would revisit the Flag Space plot that I blogged about a while back and learn how to do it. … Continue reading →

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Visualizing Baltimore 3.1: Crime and Vacant Properties, Neighborhood Level, Bit More Polished

December 11, 2012
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Visualizing Baltimore 3.1: Crime and Vacant Properties, Neighborhood Level, Bit More Polished

Redos of the plots from this post: Bit more communicative, though the overplotting is a bit annoying. Code: ## gis libraries library(spBayes) library(MBA) library(geoR) library(fields) library(sp) library(maptools) library(rgdal) library(classInt) library(lattice) library(xtable) library(spatstat) library(splancs)   ## Other packages library(ggplot2) library(foreign) library(stringr)...

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US State Maps using map_data()

December 11, 2012
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US State Maps using map_data()

Today’s short post will show how to make a simple map using map_data(). Let’s assume you have data in a CSV file that may look like this: Notice the lower case state names; they will make merging the data much easier. The variable of inte...

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