3578 search results for "GIS"

How to download complete XML records from PubMed and extract data

April 27, 2012
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How to download complete XML records from PubMed and extract data

Introduction My first PubMed script (An R Script to Automatically download PubMed Citation Counts By Year of Publication) extracted yearly counts for any number of search strings, by using PubMed’s E-utilities. Specifically, it’s using the esearch-function, which...

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Real Time Structural Break

April 27, 2012
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Real Time Structural Break

Yesterday as I played with bfast I kept thinking “Yes, but this is all in hindsight.  How can I potentially use this in a system?”  Fortunately, one of the fine authors very generously commented on my post Structural Breaks (Bull or Bear?...

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Measuring user retention using cohort analysis with R

April 27, 2012
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Measuring user retention using cohort analysis with R

Cohort analysis is super important if you want to know if your service is in fact a leaky bucket despite nice growth of absolute numbers. There’s a good write up on that subject “Cohorts, Retention, Churn, ARPU” by Matt Johnson. So how to do it using R and how to visualize it. Inspired by examples

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Randomization thoughts

April 27, 2012
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Randomization thoughts

Le Grand Casino of Monte CarloOn Monday I’m going to be leading a little stats workshop on randomization tests and null models. In preparation for this I wrote up code for null model examples I wanted to write a post that introduced the basics of these models (Null models, bootstrapping,...

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Structural Breaks (Bull or Bear?)

April 26, 2012
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Structural Breaks (Bull or Bear?)

When I spotted the bfast R package, I could not resist attempting to apply it to identify bull and bear markets.  For all the details that I do not understand, please see the references: Jan Verbesselt, Rob Hyndman, Glenn Newnham, Darius Culvenor...

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Graphic Parameters (symbols, line types, and colors) for ggplot2

April 26, 2012
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Graphic Parameters (symbols, line types, and colors) for ggplot2

Following up on John Mount’s post on remembering symbol parameters in ggplot2, I decided to give it a try and included symbols, line types, and colors (based upon Earl Glynn’s wonderful color chart).  Code follows below.    

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More PubMed data mining: looking at top 20 CBT journals

April 26, 2012
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More PubMed data mining: looking at top 20 CBT journals

In this short article I present some data of the top 20 Cognitive Behavior Therapy (CBT) journals with the most PubMed publications, and compare that to data from 2010 and 2011.

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More PubMed data mining: looking at top 20 CBT journals

April 26, 2012
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More PubMed data mining: looking at top 20 CBT journals

Introduction Continuing from what I wrote in my article An R Script to Automatically download PubMed Citation Counts By Year of Publication, I’ve now looked at article counts for journals. I did this by extending my script to download the complete article records in XML from inside R. Then...

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Installing R packages without admin rights on MS Windows

April 26, 2012
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Installing R packages without admin rights on MS Windows

Is there a life outside the office?Photo: Markus GesmannIt is not unusual that you will not have admin rights in an IT controlled office environment. But then again the limitations set by the IT department can spark of some creativity. And I have to ad...

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Further evidence that mindfulness meditation might bolster creativity

April 25, 2012
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Further evidence that mindfulness meditation might bolster creativity

Introduction I recently wrote an article about if mindfulness could aid in insight problem solving. The problem with the study, I referenced to in my article, was that it did not strictly investigate the mechanism behind mindfulness’ effect, or the impact of different techniques. However, last week a Read more »

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