Replaces 4.0, minor changes made here and there. totally replaces 4.0 as the testing move forward.
Run: DownloadAll.
Run: DataSetUp.
SSTTest reruns the SST analsyis and compares at HADSST2
Land1900Present: reruns the old version of program with a bench against CRU land figures.
Next version will integrate more of raster to the analysis, then we throw out a bunch of old code and use raster for everything.
First raster bit is working
Land<-getMask(file=LandWaterMask_File)
Inv<-getGhcnInventory()
Inv<-as.GriddedInventory(Inv,Land)
Anom<-loadAnomalies(getwd())
Data<-intersect.InvAnomalies(Inv,Anom)
Anom<-Data$Anomalies
Inv<-Data$GridInventory
CellMatrix<-as.GridCells(Anom,Inv)
#####################################################
m<-matrix(nrow=ncell(Land),ncol=ncol(CellMatrix))
b<-brick(Land)
clearValues(b)
m[as.numeric(row.names(CellMatrix)),]<-as.matrix(CellMatrix)
b<-setValues(b,m)
plot(cellStats(b,mean,na.rm=T))
Adding area weighting and land masking
m<-matrix(nrow=ncell(Land),ncol=ncol(CellMatrix))
b<-brick(Land)
clearValues(b)
m[as.numeric(row.names(CellMatrix)),]<-as.matrix(CellMatrix)
b<-setValues(b,m)
Weights <- area(b,na.rm=T,weight=T)
Temps<-Weights*b*Land
monthly<-cellStats(Temps,sum)
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Zero Inflated Models and Generalized Linear Mixed Models with R.
Zuur, Saveliev, Ieno (2012).