Interesting packages of new BioC2.7

November 1, 2010
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(This article was first published on One Tip Per Day, and kindly contributed to R-bloggers)

NuPoP

Nucleosome positioning prediction

Mulcom

Differential expression and false discovery rate calculation through multiple comparison

ontoCAT

Ontology parsing

BHC

Bayesian Hierarchical Clustering

iSeq

Bayesian Hierarchical Modeling of ChIP-seq Data Through Hidden Ising Models

URL: http://bioconductor.org/news/bioc_2_7_release/

btw, other interesting ones in BioC 2.6:

New sequence analysis tools address infrastructure (GenomicRanges, Rsamtools, girafe); ChIP-seq (BayesPeak, CSAR, PICS); digital gene expression and RNA-seq (DESeq, goseq, segmentSeq); and motif discovery (MotIV, rGADEM).

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