December 2009

SQL group by in R

December 27, 2009 | Chris

The R statistical computing environment is awesome, but weird. How to do database operations in R is a common source of questions. The other day I was looking for an equivalent to SQL group by for R data frames. You need this to compute summary statist...
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Because it’s Christmas: Microbe Mario

December 25, 2009 | David Smith

He's no Father Christmas, but he is dressed in festive red and green, and he's made of bacteria. This image, Mario, was submitted to the 2009 international Genetically Engineered Machine (iGEM) competition by Team Osaka from the nanobiology laboratories at the University of Osaka, Japan. They genetically engineered bacteria to express ... [Read more...]

Another Visualization of Unemployment

December 24, 2009 | Diego

One of the problems with choropleths is that, as explained by Hadley Wickham in this presentation, big states tend to draw more attention because of their size, but they also tend to have a low population Density. For example, Mexico City, the capital ... [Read more...]

A web-based graphics application based on R

December 24, 2009 | David Smith

FlowingData recently took a look at Jeroen Ooms' latest web-based statistical tool based on R. We've looked at his tools for random-effects models and finance visualizations before, but this one is a more general tool for creating graphs from data sets using the ggplot2 package. It's pretty slick. All you ...
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R in India: The Hindu

December 23, 2009 | David Smith

The Hindu, a leading English-language newspaper in India, published an article on December 21 about doing research with open-source tools and R got a prominent mention: Though commercial statistical packages are popular among researchers, their licensing costs drive people away from them. In this context, R https://www.r-project.org, the ... [Read more...]

malapportionment in the U.S. Senate

December 23, 2009 | jackman

The 40 Republican senators currently in the U.S. senate represent 36% of the U.S population. See the graph below (click on the thumbnail for PDF). This is something I’ve been meaning to compute for a while now, mapping the cumulative distribution of senators’ ideal points onto the cumulative distribution ... [Read more...]

The Life Scientists at FriendFeed: 2009 summary

December 23, 2009 | nsaunders

It’s Christmas Eve tomorrow and so I declare the year over. My Christmas gift to you is a summary of activity in 2009 at the FriendFeed Life Scientists group. It’s crafted using R + Ruby, with raw data and some code snippets available. If you want to see the most ...
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RInside release 0.2.0

December 22, 2009 | Thinking inside the box

RInside, a set of convenience classes to facilitate embedding of R inside of C++ applications, was updated to release 0.2.0 over the weekend. Sources as well as binary packages are at CRAN; sources are also at my RInside page The biggest news is t... [Read more...]

Multilevel and Longitudinal Modeling in Stata

December 22, 2009 | Ethan Fosse

For my "off-task" reading I recent perused an excellent book on multilevel and longitudinal modeling in Stata by Sophia Rabe-Hesketh and Anders Skrondal. The second edition (which I read) has been updated by including several chapters providing an over... [Read more...]

Visualizing Unemployment in Mexico

December 22, 2009 | Diego

What has been the impact of the economic crisis on employment? And how has it affected the different regions of Mexico? To answer the questions the first step was to obtain the unemployment data from the Banco de Información Económica at the INEGI. ... [Read more...]

CPP package: exposing C++ objects

December 22, 2009 | romain francois

I've just started working on the new package CPP, as usual the project is maintained in r-forge. The package aims at exposing C++ classes at the R level, starting from classes from the c++ standard template library. key to the package is the CPP f... [Read more...]

Forecasting the weather with R

December 22, 2009 | David Smith

The US National Centers for Environment Prediction (NCEP) produces weather forecasts for the entire world from a model that's updated every 6 hours. The data is made freely available, and with a couple of free tools to convert the data and R you can easily produce am unpdated global weather forecast ... [Read more...]

Singapore, February 19-20: Computational Topics in Finance

December 21, 2009 | David Smith

With all of the winter snows in the US this weekend, a trip to equatorial climes sounds pretty good right about now. That makes this email announcement from Rmetrics leader Diethelm Wuertz all the more tempting: Conference on 'Computational Topics in Finance' February 19/20, 2010, National University of Singapore Dear R/Rmetrics ... [Read more...]

Animation video of rgl in action

December 21, 2009 | Tal Galili

Duncan Murdoch just posted a youtube video presenting an animation clip of a 3d rgl object. Duncan even went further and wrote an explanation on how he made the video: here are the steps I used: 1.  Design a shape to be displayed, and then play with the animation functions to ... [Read more...]

MCMCglmm

December 21, 2009 | Shige

This R packages estimates Generalised Linear Mixed Models via MCMC. It provides a number of random error distributions and can be used for multivariate multilevel models (simultaneous equation model).I will do some tests and compare the results to othe...
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