Nice tables in R

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I used to think that making nice table in R is not worth the effort. However, after changing my mind for the billionth time on relatively large tables for a paper and do not wanting to reformat them again from scratch, I gave a try to the formattable package, and I liked it very much.

I post here some basic formats I learnt from the web.

Note: I usually work on remote servers with no/limited graphical capabilities (no X11, basically), and for me the formattable function doesn’t work. I use the format_table instead and write the html code to a file, which I then open. However, I never noticed differences in the behavior of format_table from what more expert users showed for fromattable.

Let’s create a table:

library(formattable)
library(knitr)
outfile<-"test.html"
data<-data.frame(id=1:10,x=round(rnorm(10,100,25)))
myhtml <- format_table(data)
write(myhtml,outfile)

This is the output

Table_01

Ok. It’s a table. I want to change the fonts, the font size, AND format the cell based on their values. It’s possible, but it was not easy for me to find a way to do that. See my post on stackoverflow with link to the demo where formattable author showed how to do that.

I will create two formatters.

font_and_grad is changing the fonts and coloring the cells with a gradient of colors based on cell values.

font_and_bar is changing the fonts and coloring the cells with a bar of a given color, with bar length based on cell values.

font_and_grad <- formatter("span",
style = x ~ style(
display = "block",
direction = "rtl",
"border-radius" = "4px",
"padding-right" = "2px",
"background-color" = csscolor(gradient(as.numeric(x),min.color="yellow",max.color="darkorange")),
"font-family" = "verdana",
"font-size" = 10))

font_and_bar <-formatter("span",
style = x ~ style(
display = "inline-block",
direction = "rtl",
"border-radius" = "4px",
"padding-right" = "2px",
"background-color" = csscolor("lightgreen"),
width = percent(proportion(x)),
"font-family" = "verdana",
"font-size" = 10))

myhtml <- format_table(data, list(id=font_and_grad,x=font_and_bar))
write(myhtml,outfile)

 

Table_02

Now, the only horrible thing left are the header fonts. I had troubles accomplishing this, and at the end I decided that I would simply change the html code.

myhtml<-gsub("

Table_03

Maybe not the best approach, but it worked! Another approach has been suggested on stackoverflow, but it wasn’t very well suited for me. As usual, comments and suggestions are welcome.

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