Posts Tagged ‘ Simulation ’

Poster at MCMSki III

December 28, 2010
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Poster at MCMSki III

Here is the poster presented at MCMSki III next week by Pierre Jacob about our joint paper on parallelisation: Filed under: R, Statistics, Travel Tagged: Adapski, MCMC, MCMSki, Metropolis-Hastings, Monte Carlo Statistical Methods, parallelisation, pos...

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Questions on the parallel Rao-Blackwellisation

December 21, 2010
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Questions on the parallel Rao-Blackwellisation

Pierre Jacob and I got this email from a student about our parallel Rao-Blackwellisation paper. Here are some parts of the questions and our answer: Although I understand how the strategy proposed in the paper helps in variance reduction, I do not understand why you set b=1 (mentioned in Section 3.2) and why it plays

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Computing evidence

November 28, 2010
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Computing evidence

The book Random effects and latent variable model selection, edited by David Dunson in 2008 as a Springer Lecture Note. contains several chapters dealing with evidence approximation in mixed effect models. (Incidentally, I would be interested in the story behind the  Lecture Note as I found no explanation in the backcover or in the preface.

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Random graphs with fixed numbers of neighbours

November 24, 2010
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Random graphs with fixed numbers of neighbours

In connection with Le Monde puzzle #46, I eventually managed to write an R program that generates graphs with a given number n of nodes and a given number k of edges leaving each of those nodes. (My early attempt was simply too myopic to achieve any level of success when n was larger than

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Graphical comparison of MCMC performance [arXiv:1011.445]

November 22, 2010
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Graphical comparison of MCMC performance [arXiv:1011.445]

A new posting on arXiv by Madeleine Thompson on a graphical tool for assessing performance. She has developed a software called SamplerCompare, implemented in R and C. The graphical evaluation plots “log density evaluations per iteration times autocorrelation time against a tuning parameter in a grid of plots where rows represent distributions and columns represent

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Le Monde puzzle [43]

November 7, 2010
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Le Monde puzzle [43]

Here is the puzzle in Le Monde I missed last week: Given a country with 6 airports and a local company with three destinations from each of the six airports, is it possible to find a circular trip with three intermediate stops from one of the airports? From all of the airports? One more airport

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Galton & simulation

September 27, 2010
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Galton & simulation

Stephen Stigler has written a paper in the Journal of the Royal Statistical Society Series A on Francis Galton’s analysis of (his cousin) Charles Darwin’ Origin of Species, leading to nothing less than Bayesian analysis and accept-reject algorithms! “On September 10th, 1885, Francis Galton ushered in a new era of Statistical Enlightenment with an address

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R tee-shirt

September 21, 2010
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R tee-shirt

I gave my introduction to the R course in a crammed amphitheatre of about 200 students today. Had to wear my collectoR teeshirt from Revolution Analytics, even though it only made the kids pay attention for about 30 seconds… The other few “lines” that worked were using the Proctor & Gamble “car 54″ poster and

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NetLogo-R-Extension

August 1, 2010
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NetLogo-R-Extension

Here is a bridge between NetLogo and R, which looks very interesting. But I was not able to get it work on my Ubuntu box (running the latest R).

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Stratified sampling

June 9, 2010
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Stratified sampling

The recently arXived paper of Goldstein, Rinott and Scarsini studies the impact of refining a partition on the precision of a stratified maximising/integration Monte Carlo approach. Quite naturally, if the partition gets improved, simulating points in each set of the partition can only improve the quality of the approximation, whether the problem is in maximising

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