910 search results for "how to import image file to R"

Announcing the Publication of R Machine Learning Essentials

November 10, 2014
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Announcing the Publication of R Machine Learning Essentials

R machine learning essentials will be published soon. T

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Visualising stranded RNA-seq data with Gviz/Bioconductor

November 6, 2014
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Visualising stranded RNA-seq data with Gviz/Bioconductor

Gviz is a really great package for visualising genomics data in R. Recently I have been looking at stranded RNA-seq data, which provides the ability to differentiate sense and antisense expression from a genomic locus thanks to the way in … Continue reading →

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High performance JSON streaming in R: Part 1

November 5, 2014
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High performance JSON streaming in R: Part 1

The jsonlite stream_in and stream_out functions implement line-by-line processing of JSON data over a connection, such as a socket, url, file or pipe. Thereby we can construct a data processing pipeline that can handle large (or unlimited) amounts of data with limited memory. This post will walk through some examples...

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Analyzing coverage of R unit tests in packages – the {testCoverage} package

November 4, 2014
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Analyzing coverage of R unit tests in packages – the {testCoverage} package

(guest post by Andy Nicholls and the team of Mango Business Solutions) Introduction Testing is a crucial component in ensuring that the correct analyses are deployed. However it is often considered unglamorous; a poor relation in terms of the time and resources allocated to it in the process of developing a package. But with the

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Creating More Effective Graphs

November 4, 2014
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Creating More Effective Graphs

A few years ago I ordered a copy of the 2005 edition of Creating More Effective Graphs by Naomi Robbins. Somewhat shamefully I admit that the book got buried beneath a deluge of papers and other books and never received the attention it was due. Having recently discovered the R Graph Catalog, which implements many

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Let’s Do Some MORE Hierarchical Bayes Choice Modeling in R!

November 3, 2014
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Let’s Do Some MORE Hierarchical Bayes Choice Modeling in R!

R enables us to "test drive" statistical models by running simulations and analyzing actual data. We can look at the output and get some sense of how the whole thing works. The goal is to provide a realistic application that is not too difficult to fol...

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R 3.1.2 release (and upgrading for Windows users)

November 3, 2014
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R 3.1.2 release (and upgrading for Windows users)

R 3.1.2 (codename “Pumpkin Helmet“) was released last week. You can get the latest binaries version from here. (or the .tar.gz source code from here). The full list of new features and bug fixes is provided below. Upgrading to R 3.1.2 on Windows If you are using Windows you can easily upgrade to the latest version of R using the installr

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Leveraging R for Job Openings for Economists

November 1, 2014
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Leveraging R for Job Openings for Economists

Quite a few people emailed me regarding my post on Econ Job Market. This post is about how you can use very basic and simple R tools to help you in sorting through the Job Openings for Economists list from the American Economic Association.This definitely helped me in developing my spreadsheet of places to apply

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R Class for Wildfire Scientists

October 29, 2014
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R Class for Wildfire Scientists

This entry is part 14 of 14 in the series Using RMazama Science has just finished creating class materials on using R for the AirFire team at the USFS Pacific Wildland Fire Sciences Lab in Seattle, Washington. This team of …   read more ...

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Visualizing (generalized) linear mixed effects models with ggplot #rstats #lme4

October 26, 2014
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Visualizing (generalized) linear mixed effects models with ggplot #rstats #lme4

In the past week, colleagues of mine and me started using the lme4-package to compute multi level models. This inspired me doing two new functions for visualizing random effects (as retrieved by ranef()) and fixed effects (as retrieved by fixed()) of (generalized) linear mixed effect models. The upcoming version of my sjPlot package will contain

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