860 search results for "how to import image file to r"

DESeq vs edgeR Comparison

September 18, 2012
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DESeq vs edgeR Comparison

Update (Dec 18, 2012): Please see this related post I wrote about differential isoform expression analysis with Cuffdiff 2.DESeq and edgeR are two methods and R packages for analyzing quantitative readouts (in the form of counts) from high-throughput e...

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Great Circles, Black Holes, and Community Events Part 3 of 3

September 14, 2012
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Great Circles, Black Holes, and Community Events Part 3 of 3

The second community event is the Soldier Hollow Junior Olympics (SoHo), again found in the Heber Valley area. Building upon the previous posts (part 1 and part 2) this one will show an event that has more people coming from greater distance. Take the bar charts for the number of participants and the cities they are...

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Great Circles, Black Holes, and Community Events Part 2 of 3

September 12, 2012
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Great Circles, Black Holes, and Community Events Part 2 of 3

This post will examine the Heber Valley Railroad, a small town tourist attraction using event gravitational pull. Using the information from part 1 the two factors associated with the events gravity, the number of participants, and the distance they traveled. The number of participants can be shown using bar charts, histograms, and summary tables. The distance traveled...

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Big data analysis, for free, in R (or “How I learned to load, manipulate, and save data using the ff package”)

September 11, 2012
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Big data analysis, for free, in R (or “How I learned to load, manipulate, and save data using the ff package”)

Before choosing to support the purchase of Statistica at my workplace, I came across the ff package as an option for working with really big datasets (with special attention paid to ff dataframes, or ffdf). It looked like a good … Continue reading →

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Item Response Theory: Developing Your Intuition

September 10, 2012
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Item Response Theory: Developing Your Intuition

Suppose that you accepted my argument from the last two posts on halo effects and bifactor models.  As you might recall, I argued that when respondents complete rating scales, they predominating rely on their generalized impression with a more minor role played by the specific features that the ratings were written to measure.  Consequently, we...

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In praise of ProjectTemplate for reproducible research

September 7, 2012
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In praise of ProjectTemplate for reproducible research

As you might know from some of my previous posts, I’m a big fan of making my scientific work reproducible. My main reasons for being so keen on this are: 1. Reproducibility is key to science – if it can’t be reproduced then it can not be verified (that is, the experiment can’t be tried again

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Export R plot to Illustrator or Inkscape

September 6, 2012
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Export R plot to Illustrator or Inkscape

Have you ever exported an R plot as a PDF and tried to edit it further by importing the PDF into a vector graphics program like Adobe Illustrator or Inkscape? What typically happens is the points on the plot get...

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Near-instant high quality graphs in R

September 5, 2012
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Near-instant high quality graphs in R

One of the main attractions of R (for me) is the ability to produce high quality graphics that look just the way you want them to. The basic plot functions are generally excellent for exploratory work and for getting to know your data. Most packages have additional functions for appropriate exploratory work or for summarizing

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omg lol brb txt l8r – Text Message Analysis, 2011-2012

September 3, 2012
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omg lol brb txt l8r – Text Message Analysis, 2011-2012

IntroductionI will confess, I don't really like texting. I communicate through text messages, because it does afford many conveniences, and occupies a sort of middle ground between actual conversation and email, but that doesn't mean that I like it. E...

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Custom CSS for HTML generated using RStudio

August 26, 2012
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Custom CSS for HTML generated using RStudio

People have been telling me for a while that the latest version of RStudio, the IDE for R, is a great way to generate reports. I finally got around to trying it out and for once, the hype is justified. Start with this excellent tutorial from Jeremy Anglim. Briefly: the process is not so different

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