Using R to Visualizing Information Flows on Wikipedia Talk Pages

March 6, 2012
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Using R to Visualizing Information Flows on Wikipedia Talk Pages

Wikipedia talk pages allow editors to discuss the evolving content on related Wikipedia articles. Sometimes the topic of a page is controversial and the talk page threads can become heated with different posts invoking a wide range of values in the kinds of appeals they use in their arguments. For example, in one thread you

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Russian elections

March 6, 2012
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Russian elections

Just a few words about the Russian election. I read this entry http://www.badscience.net/2012/03/is-there-statistical-evidence-of-fraud-in-the-russian-election-data/ and thought to look for myself. For me it seems the data is not good enough ...

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Java based GUI for R

March 6, 2012
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JGR is a pretty nice Java based GUI for R.  The primary reason I like this is that it is truly cross platform, and will work the same for any operating systemAdded benefits are that some packages like rJava and others tend to break on Mac OSX, but...

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Big Data Analytics to Revolutionize Services

March 6, 2012
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Revolution Analytics' CEO Dave Rich was interviewed by Wikibon's David Vellante and SiliconAngle's John Furrier at the Strata 2012 conference last week. Given Dave's background at Accenture Analytics, the conversation naturally turned to impact of predictive analytics and R on business services. (See the video after the jump, below.) Bret Latmore of SiliconANGLE provides highlights of the interview, including...

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Ggplot2 Notes

March 6, 2012
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During the time I have used R the base graphics package has met my needs, although I have been aware of ggplot2 but found learning it a bit of a struggle so have pretty much ignored it until now. Most … Continue reading →

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Missing my Statsy Goodness? Check out #SciFund!

March 6, 2012
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Missing my Statsy Goodness? Check out #SciFund!

I know, I know, I have been kinda lame about posting here lately. But that’s because my posting muscle has been focused on the new analyses for what makes a succesful #SciFund proposal. I’ve been posting them at the #SciFund blog under the Analysis tag – so check it out. There’s some fun stats, and

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Pathway Analysis for High-Throughput Genomics Studies

March 6, 2012
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Pathway Analysis for High-Throughput Genomics Studies

I get a lot of requests in the core about running a "pathway analysis." Someone ran a handful of gene expression arrays, or better yet, ran an RNA-seq experiment (with replicates!). These, and many other kinds of high-throughput assays (GWAS, ChIP-seq,...

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R101

March 6, 2012
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R101

I’m preparing “R101,” an introductory workshop on the statistical software R. Perhaps other beginners might find some use in the following summary and resources. (See also the post on resources for teaching yourself introductory statistics.) Do you have obligatory screenshots … Continue reading →

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Screencast: The Making of 17018d5488

March 6, 2012
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Screencast: The Making of 17018d5488

The following screencast demonstrates the use of R, the quantmod R package and bash to process SPX data from 1950. An explanation on how to access a git repository that includes the plots and the R console history is also provided. This screencast prod...

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Multiple Factor Model – Building 130/30 Index

March 5, 2012
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Multiple Factor Model – Building 130/30 Index

Nico brought to my attention the 130/30: The New Long-Only (2008) by A. Lo, P. Patel paper in his comment to the Multiple Factor Model – Building CSFB Factors post. This paper presents a very detailed step by step guide to building 130/30 Index using average CSFB Factors as the alpha model and MSCI Barra

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Recovering Marginal Effects and Standard Errors from Interaction Terms in R

March 5, 2012
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When I fit models with interactions, I often want to recover not only the interaction effect but also the marginal effect (the main effect + the interaction) and of course the standard errors. There are a couple of ways to do this in R but I ended writ...

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Recovering Marginal Effects and Standard Errors from Interaction Terms in R

March 5, 2012
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When I fit models with interactions, I often want to recover not only the interaction effect but also the marginal effect (the main effect + the interaction) and of course the standard errors. There are a couple of ways to do this in R but I ended writ...

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Recovering Marginal Effects and Standard Errors from Interaction Terms in R

March 5, 2012
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When I fit models with interactions, I often want to recover not only the interaction effect but also the marginal effect (the main effect + the interaction) and of course the standard errors. There are a couple of ways to do this in R but I ended writ...

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how to build a for loop in r

March 5, 2012
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(This article was first published on twotorials by anthony damico, and kindly contributed to R-bloggers) To leave a comment for the author, please follow the link and comment on his blog: twotorials by anthony damico. R-bloggers.com offers daily e-mail updates about R news and tutorials on topics such as: visualization (ggplot2, Boxplots, maps, animation), programming (RStudio, Sweave, LaTeX, SQL,...

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how to create a logical test and then build an if statement in r

March 5, 2012
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(This article was first published on twotorials by anthony damico, and kindly contributed to R-bloggers) To leave a comment for the author, please follow the link and comment on his blog: twotorials by anthony damico. R-bloggers.com offers daily e-mail updates about R news and tutorials on topics such as: visualization (ggplot2, Boxplots, maps, animation), programming (RStudio, Sweave, LaTeX, SQL,...

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Airline Fares Decreasing Steadily

March 5, 2012
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Airline Fares Decreasing Steadily

Description: Yearly average airline fare since 1995. Data: http://www.bts.gov/ Analysis: When taking the average price of domestic airline fares, there is a clear trend indicating that flying is becoming more affordable - when adjusted for infl...

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Benford’s Law and fraud in the Russian election

March 5, 2012
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Benford’s Law and fraud in the Russian election

Earlier today Ben Goldacre posted about using Benford’s Law to try and detect fraud in the Russian elections. Read that now, or the rest of this post won’t make sense. This is a loose R translation of Ben’s Stata code. The data is held in a Google doc. While it is possible to directly retrieve

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NIT: Fatty acids study in R – Part 003

March 5, 2012
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NIT: Fatty acids study in R – Part 003

As I told you I´m a beginner in "R", so I realize that I have to prepare my data a little bit in order to continue from my previous post ( NIT: Fatty acids study in R - Part 002) after getting some errors. Anyway I´m really fascinated ...

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Futures price prediction using the order book data

March 5, 2012
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Futures price prediction using the order book data

It has been a couple of months since my last post; busy with lots of projects.I had some fun playing around with data from Interactive Brokers API.  It turns out that it is relatively easily to get hold of the raw market data relating to both trades and order book changes for CME/NYMEX commodity futures.  For the purposes of...

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New R User Groups in Lithuania, Birmingham, Taiwan

March 5, 2012
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Three new local R user groups to add to the list today: from Lithuania, Taiwan, and Birmingham (UK). The Chinese Academy of R Software (CARS) serves R users in Taipei (Taiwan). It has been approved by the Ministry of the Interior of Taiwan, and has more than 500 "likes" on its Facebook page. The Birmingham R Users Meeting (with...

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Dr Sanjiv Das presents "Using R for Analyzing Loans, Portfolios and Risk"

March 5, 2012
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In a free webinar tomorrow at 10AM Pacific, Professor of Finance Dr Sanjiv Das will present, "Using R for Analyzing Loans, Portfolios and Risk: From Academic Theory to Financial Practice". I saw a version of Dr Das's talk a couple of months ago at the Bay Area R User Group meeting, and it was outstanding. I particularly recall his...

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Montreal R workshop on Causal Inference

March 5, 2012
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Montreal R workshop on Causal Inference

Monday, March 05, 2012  14h-16h N4/17 Stewart Biology Building, McGill University Prof. Bill Shipley from Université de Sherbrooke Topics Structural equation modelling Graphical models for understanding causal analysis Testing for goodness of fit...

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Interview: Patrick Burns Quantitative Finance in R

Interview: Patrick Burns Quantitative Finance in R

Dr. Patrick Burns is the founder of Burns Statistics, providing consulting and bespoke software specializing in quantitative finance, programming in the S language, and optimization via genetic algorithms and simulated annealing. Patrick has written m...

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The shadows and light of models

March 5, 2012
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The shadows and light of models

How wide is the darkness? Uses of models The main way models are used is to: shine light on the “truth” We create and use a model to learn how some part of the world works. But there is a another use of models that is unfortunately rare — a use that should be common … Continue reading...

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Plot maps like a boss

March 5, 2012
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Plot maps like a boss

A new package OpenStreetMap has been released to CRAN this week which is designed to allow you to easily add satellite imagery, or open street maps to your plots. Raster maps are a great way to add context to your spatial data with a minimum outlay of effort. The syntax in OpenStreetMap is fairly simple, just give

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BerkeleyEarth Version 1.6

March 5, 2012
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BerkeleyEarth Version 1.6

Version 1.6 has just been submitted to CRAN and I will post the source here in the dropbox. Version 1.6 will probably be stable for a long time unless I find a bug. The main additions I made were adding a few functions to make some things easier, and I converted two files–flags and sources–

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ThinkStats … in R (including Example 1.2)

March 4, 2012
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ThinkStats (by Allen B. Downey) is a good book to get you familiar with statistics (and even Python, if you’ve done some scripting in other languages). I thought it would be interesting to present some of the examples & exercises in the book in R. Why? Well, once you’ve gone through the material in a

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DEoptim in Parallel

March 4, 2012
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Running DEoptim in parallel has been on the development team's wishlist for awhile.  It had not been a priority though, because none of us have personally needed it.  An opportunity arose when Kris Boudt approached me about collaborating to a...

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di Roma

March 4, 2012
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di Roma

It has been a wonderful week in Roma, a mix of pleasant work and enjoyable free-time! I gave the ABC advanced course for the second time in a month so it did not require much in terms of preparation and there was a good sized audience with attentive (if too silent!) students and friends as

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