(This article was first published on Yu-Sung Su's Blog, and kindly contributed to R-bloggers)
I should have posted this earlier. In my previous post, I have discussed the speed issue in R briefly. The speed issue unfortunately are two of the shortcomings of R. The other one is that R does not handle big data set very well. So instead of waiting for R to improve, for those who cannot wait (me included), we have to go back to the source. By this I mean that we should program some
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Zero Inflated Models and Generalized Linear Mixed Models with R.
Zuur, Saveliev, Ieno (2012).