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Machine Learning Ex4 – Logistic Regression

October 24, 2011
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Machine Learning Ex4 – Logistic Regression

Exercise 4 required implementing Logistic Regression using Newton's Method. The dataset in use is 80 students and their grades of 2 exams, 40 students were admitted to college and the other 40 students were not. We need to implement a binary classification model to estimates college admission based on the student's scores on...

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ggplot2 Version of Figures in “25 Recipes for Getting Started with R”

August 16, 2011
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ggplot2 Version of Figures in “25 Recipes for Getting Started with R”

In order to provide an option to compare graphs produced by basic internal plot function and ggplot2, I recreated the figures in the book, 25 Recipes for Getting Started with R, with ggplot2. The code used to create the images is in separate paragraphs, allowing easy comparison. Read...

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the batman equation

August 13, 2011
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the batman equation

HardOCP has an image with an equation which apparently draws the Batman logo. Read More: 1295 Words Totally

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ProjectEuler-Problem 46

June 21, 2011
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ProjectEuler-Problem 46

It was proposed by Christian Goldbach that every odd composite number can be written as the sum of a prime and twice a square. 9 = 7 + 212 15 = 7 + 222 Read More: 461 Words Totally

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R package DOSE released

June 12, 2011
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Disease Ontology (DO) provides an open source ontology for the integration of biomedical data that is associated with human disease. DO analysis can lead to interesting discoveries that deserve further clinical investigation. DOSE was designed for semantic similarity measure and enrichment analysis. Read More: 619 Words Totally

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[Project Euler] – Problem 58

May 21, 2011
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[Project Euler] – Problem 58

Starting with 1 and spiralling anticlockwise in the following way, a square spiral with side length 7 is formed. 37 36 35 34 33 32 31 38 17 16 15 14 13 30 Read More: 597 Words Totally

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[Project Euler] – Problem 57

May 19, 2011
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It is possible to show that the square root of two can be expressed as an infinite continued fraction. √ 2 = 1 + 1/(2 + 1/(2 + 1/(2 + … ))) = 1.414213… By expanding this for the first four iterations, we get: Read More: 547 Words Totally

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Machine Learning Ex3 – Multivariate Linear Regression

March 29, 2011
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Machine Learning Ex3 – Multivariate Linear Regression

Part 1. Finding alpha. The first question to resolve in Exercise 3 is to pick a good learning rate alpha. This require making an initial selection, running gradient descent and observing the cost function. Read More: 221 Words Totally

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clusterProfiler in Bioconductor 2.8

March 26, 2011
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In recently years, high-throughput experimental techniques such as microarray and mass spectrometry can identify many lists of genes and gene products. The most widely used strategy for high-throughput data analysis is to identify different gene clusters based on their expression profiles. Another commonly used approach is to annotate these genes to biological knowledge, such as Gene Ontology (GO) and...

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Machine Learning Ex2 – Linear Regression

March 22, 2011
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Machine Learning Ex2 – Linear Regression

Thanks to this post, I found OpenClassroom. In addition, thanks to Andrew Ng and his lectures, I took my first course in machine learning. These videos are quite easy to follow. Exercise 2 requires implementing gradient descent algorithm to model data with linear regression. Read More: 243 Words Totally

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