Update 10/11/2011: There’s a good discussion on RedditUpdate 10/12/2011: Note manipulate package and highlight data.table packageThe R statistical computing platform is a rising star that’s been gaining popularity and attention, but it gets no respect in the hood. It’s telling that a popular guide to R is called The R Inferno, and that advocacy pieces

Zero Inflated Models and Generalized Linear Mixed Models with R.
Zuur, Saveliev, Ieno (2012).