Blog Archives

Adaptive tau-leaping in SSA

July 26, 2007
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Adaptive tau-leaping in SSA

Just a brief update on my activities 11 days before the R package GillespieSSA is to be released. I have been hacking away on the code, debugging, and running test simulations like there is no tomorrow. The last SSA implementation … Continue reading →

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Abstract for useR! 2007 poster

July 15, 2007
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Abstract for useR! 2007 poster

Here’s my submitted abstract for the poster I will be presenting at the useR! 2007 meeting in August. GillespieSSA: A stochastic simulation package for R Mario Pineda-Krch Center for Animal Disease Modeling and Surveillance University of California, Davis Abstract Stochastic … Continue reading →

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ESA 2007 – San Jose here I come!

July 12, 2007
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ESA 2007 – San Jose here I come!

Finally took the leap and decided to go the ESA (Ecological Society of America) meeting despite it clashing with the useR! meeting. After checking out their smörgåsbord of a program there were simply too many yummy temptations, e.g. Alan Hastings … Continue reading →

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useR! 2007 – Ames here I come!

July 6, 2007
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useR! 2007 – Ames here I come!

Yesterday I decided that I will go the the useR! 2007 meeting after all. Initially I was a bit apprehensive, I was not sure if I had the time to spare and I like to present something when I go … Continue reading →

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Where is all the Open Source computer algebra software?

July 4, 2007
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Where is all the Open Source computer algebra software?

For a long time I have been puzzled by the apparent lack of a comprehensive Open Source computer algebra software, i.e. what Octave is to MatLab and what R is to S. In other words, where is the Open Source … Continue reading →

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