I am a somewhat minimalist R user. I feel uncomfortable if something is not in a good order, such as the names of variables and documents, the structures of my codes and projects. I prefer my data stored in .txt or .csv so I can load them to R using read.table or read.csv. For most of the time we...

Zero Inflated Models and Generalized Linear Mixed Models with R.
Zuur, Saveliev, Ieno (2012).