On Revolution Analytics partner Cloudera's blog, Uri Laserson has posted an excellent guide to resampling from a large data set in Hadoop. Resampling is an important step in fitting ensemble models (including random forests and other bagging techniques), and Uri provides a step-by-step guide to implementing resampling methods using RHadoop. He provides the complete map-reduce code in the R...

Zero Inflated Models and Generalized Linear Mixed Models with R.
Zuur, Saveliev, Ieno (2012).