Blog Archives

Connecting R to Everything with IFTTT

June 18, 2015
By
Connecting R to Everything with IFTTT

IFTTT ("if this then that") is one of my favorite tools. I use it to keep and share articles, turn on my home's lights at sundown, alert me when certain keywords are mentioned on Twitter/Reddit/etc., and many other things. Recently, the great people at IFTTT announced the Maker Channel, which allows recipes to make and receive web requests. This...

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Connecting R to Everything with IFTTT

June 18, 2015
By
Connecting R to Everything with IFTTT

IFTTT (“if this then that”) is one of my favorite tools. I use it to keep and share articles, turn on my home’s lights at sundown, alert me when certain keywords are mentioned on Twitter/Reddit/etc., and many other things. Recently, the great people at IFTTT announced the Maker Channel, which allows recipes to make and receive...

Read more »

Connecting R to Everything with IFTTT

June 18, 2015
By
Connecting R to Everything with IFTTT

IFTTT (“if this then that”) is one of my favorite tools. I use it to keep and share articles, turn on my home’s lights at sundown, alert me when certain keywords are mentioned on Twitter/Reddit/etc., and many other things. Recently, the great people at IFTTT announced the Maker Channel, which allows recipes to make and receive...

Read more »

Creating Reproducible Software Environments with Packrat

July 15, 2014
By

Open science has grown tremendously in the past few years. While there’s stilla long way to go, the availability of data, software, and other materials is making it possible to re-use these products to expand upon previous work and apply them to new areas. Through responsible conduct of research (RCR) …

Read more »

Creating Reproducible Software Environments with Packrat

July 15, 2014
By

Open science has grown tremendously in the past few years. While there’s still a long way to go, the availability of data, software, and other materials is making it possible to re-use these products to expand upon previous work and apply them to new areas. Through responsible conduct of research (RCR) training, journal requirements, changing individual and institutional principles,...

Read more »

Creating Reproducible Software Environments with Packrat

July 15, 2014
By

Open science has grown tremendously in the past few years. While there’s still a long way to go, the availability of data, software, and other materials is making it possible to re-use these products to expand upon previous work and apply them to new areas. Through responsible conduct of research (RCR) training, journal requirements, changing individual and institutional principles,...

Read more »

Plotting Microtiter Plate Maps

May 1, 2014
By
Plotting Microtiter Plate Maps

I recently wrote about my workflow for Analyzing Microbial Growth with R. Perhaps the most important part of that process is the plate map, which describes the different experimental variables and where they occur. In the example case, the plate map described which strain was growing and in which environment …

Read more »

Plotting Microtiter Plate Maps

May 1, 2014
By
Plotting Microtiter Plate Maps

I recently wrote about my workflow for Analyzing Microbial Growth with R. Perhaps the most important part of that process is the plate map, which describes the different experimental variables and where they occur. In the example case, the plate map described which strain was growing and in which environment for each of the wells used in a...

Read more »

Plotting Microtiter Plate Maps

May 1, 2014
By
Plotting Microtiter Plate Maps

I recently wrote about my workflow for Analyzing Microbial Growth with R. Perhaps the most important part of that process is the plate map, which describes the different experimental variables and where they occur. In the example case, the plate map described which strain was growing and in which environment for each of the wells used in a...

Read more »

Analyzing Microbial Growth with R

April 9, 2014
By
Analyzing Microbial Growth with R

In experimental evolution research, few things are more important than growth. Both the rate of growth and the resulting yield can provide direct insights into a strain or species’ fitness. Whether one strain with a trait of interest can outgrow (and outcompete) another that possesses a variation of that trait …

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