Blog Archives

Bio7 2.3 Released!

August 28, 2015
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Bio7 2.3 Released!

28.08.2015 As a result of the useR conference 2015 with fantastic workshops and presentations where I also presented my software I released a new version of Bio7 with many improvements and new features inspired by the R conference and important for the next ImageJ conference 2015 where I will give a Bio7 workshop. For this

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ImageJ Selections to Georeferenced Spatial Objects

August 5, 2015
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ImageJ Selections to Georeferenced Spatial Objects

05.08.2015 As a result of the last UseR conference and some great spatial workshops and talks where I participated I decided to rework the selection dialog for the upcoming Bio7 2.3 to transfer ImageJ selection data as ‘Spatial Objects’ with the help of the package ‘sp‘ and the Java GDAL binding (version 1.7.1). Video: One

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Bio7 at the useR! Conference 2015

June 28, 2015
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I recently released a new version of Bio7 just in time and planned for the useR conference 2015 where I will present Bio7 in the Ecology oral session titled: “A Graphical User Interface for R in an Integrated Development Environment for Ecological Modeling, Scientific Image Analysis and Statistical Analysis “. I hope to see you

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Bio7 2.2 for Windows, Linux and MacOSX released

June 26, 2015
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Bio7 2.2 for Windows, Linux and MacOSX released

26.06.2015 I released a new version of Bio7 for Windows, Linux and MacOSX simultaneously. This release is based on Eclipse 4.5 which was published on Wednesday. It comes bundled with the latest ImageJ version (1.49u) and the latest R version (bundled with Windows and Mac). Download at: http://bio7.org New features: Based on Eclipse 4.5 (Mars)

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Bio7 2.1 Release Candidate RC2 for MacOSX Available

May 29, 2015
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Bio7 2.1 Release Candidate RC2 for MacOSX Available

29.05.2015 I published a MacOSX release candidate for Bio7 2.1 based on Eclipse 4.5 RC2. This release was tested on MacOSX 10.10. The final release will be published after the official Eclipse 4.5 release. Installation: Bio7 2.1 comes as a regular *.dmg installation package. Just drag the Bio7.app to the Applications folder. Bio7 2.1 comes

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Bio7 2.1 for Linux 64-bit and Windows 32-bit released

May 19, 2015
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Bio7 2.1 for Linux 64-bit and Windows 32-bit released

19.05.2015 After the 64-bit release of Windows the Linux 64-bit and Windows 32-bit release can be downloaded at: http://bio7.org Linux installation: The installation of Bio7 is similar to the installation of the Eclipse environment. Simply decompress the downloaded *.zip file in a preferred location on your file system. After decompressing with a standard zip-tool (like

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Bio7 2.1 for Windows 64 bit released

May 18, 2015
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Bio7 2.1 for Windows 64 bit released

18.05.2015 I released a new version of the Integrated Development Environment Bio7 with new functions and many visual layout improvements of the Bio7 Graphical User Interface. Bio7 2.1 can be downloaded here: http://bio7.org Release notes Bio7 2.1: R: Updated R to version 3.2.0. Improved the R perspective layout (see below). Improved the syntax coloring and

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Knitr with Bio7

April 16, 2015
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16.04.2015 In Bio7 it is possible to write a documentation in knitr. A simple visual and textual HTML editor (based on JavaFX) and an embedded Latex editor (based on TeXclipse) helps in the creation of a *.html or *.pdf documentation. For the *.pdf creation a TeX environment has to be available (Windows e.g. MiKTeX). Overview

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Bio7 2.0 for Windows 32 bit Release

March 24, 2015
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24.03.2015 Because of some requests of a Windows 32 bit version of Bio7 2.0 I uploaded a built to sourceforge. Release notes: Updated R to version 3.1.3 Updated ImageJ to version 1.49p Added some ImageJ dialog options (to stay on top, e.g., the ROI Manager) Updated Java to version 1.8.40 Updated the JavaFX embedded SceneBuilder

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Bio7 Overview Video

March 6, 2015
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06.03.2015 For the upcoming EclipseCon 2015 where I present the Bio7 application I created an overview video (see below) which summarizes some of the main Bio7 functionality. This time the Eclipse Con is co-located with the FOSS4G. So many interesting things will be presented at one place. If you find the time don’t miss this

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