Time series cross-validation using crossval
Want to share your content on R-bloggers? click here if you have a blog, or here if you don't.
Time series cross-validation is now available in crossval, using function crossval::crossval_ts. Main parameters for crossval::crossval_ts include:
fixed_windowdescribed below in sections 1 and 2, and indicating if the training set’s size is fixed or increasing through cross-validation iterationsinitial_window: the number of points in the rolling training sethorizon: the number of points in the rolling testing set
Yes, this type of functionality exists in packages such as caret, or forecast, but with different flavours. We start by installing crossval from its online repository (in R’s console):
library(devtools)
devtools::install_github("thierrymoudiki/crossval")
library(crossval)
1 – Calling crossval_ts with option fixed_window = TRUE

initial_windowis the length of the training set, depicted in blue, which is fixed through cross-validation iterations. horizon is the length of the testing set, in orange.
1 – 1 Using statistical learning functions
# regressors including trend
xreg <- cbind(1, 1:length(AirPassengers))
# cross validation with least squares regression
res <- crossval_ts(y=AirPassengers, x=xreg, fit_func = crossval::fit_lm,
predict_func = crossval::predict_lm,
initial_window = 10,
horizon = 3,
fixed_window = TRUE)
# print results
print(colMeans(res))
ME RMSE MAE MPE MAPE
0.16473829 71.42382836 67.01472299 0.02345201 0.22106607
1 - 2 Using time series functions from package forecast
res <- crossval_ts(y=AirPassengers, initial_window = 10,
horizon = 3,
fcast_func = forecast::thetaf,
fixed_window = TRUE)
print(colMeans(res))
ME RMSE MAE MPE MAPE
2.657082195 51.427170382 46.511874693 0.003423843 0.155428590
2 - Calling crossval_ts with option fixed_window = FALSE

initial_windowis the length of the training set, in blue, which increases through cross-validation iterations. horizon is the length of the testing set, depicted in orange.
2 - 1 Using statistical learning functions
# regressors including trend
xreg <- cbind(1, 1:length(AirPassengers))
# cross validation with least squares regression
res <- crossval_ts(y=AirPassengers, x=xreg, fit_func = crossval::fit_lm,
predict_func = crossval::predict_lm,
initial_window = 10,
horizon = 3,
fixed_window = FALSE)
# print results
print(colMeans(res))
ME RMSE MAE MPE MAPE
11.35159629 40.54895772 36.07794747 -0.01723816 0.11825111
2 - 2 Using time series functions from package forecast
res <- crossval_ts(y=AirPassengers, initial_window = 10,
horizon = 3,
fcast_func = forecast::thetaf,
fixed_window = FALSE)
print(colMeans(res))
ME RMSE MAE MPE MAPE
2.670281455 44.758106487 40.284267136 0.002183707 0.135572333
Note: I am currently looking for a gig. You can hire me on Malt or send me an email: thierry dot moudiki at pm dot me. I can do descriptive statistics, data preparation, feature engineering, model calibration, training and validation, and model outputs’ interpretation. I am fluent in Python, R, SQL, Microsoft Excel, Visual Basic (among others) and French. My résumé? Here!

Under License Creative Commons Attribution 4.0 International.
R-bloggers.com offers daily e-mail updates about R news and tutorials about learning R and many other topics. Click here if you're looking to post or find an R/data-science job.
Want to share your content on R-bloggers? click here if you have a blog, or here if you don't.