regor Gorjanc published an interesting article “Using Sweave with LyX” in R News in 2008, which (I believe) makes it much easier to use Sweave. I use command-line tools a lot every day, but I am still “GUI-addicted”. (I don’t want to comment more about Microsoft Word here.) LyX is a somewhat WYSIWYG tool based




Zero Inflated Models and Generalized Linear Mixed Models with R.
Zuur, Saveliev, Ieno (2012).
