Blog Archives

RExcel

October 13, 2009
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I am not a fan of MS Windows software. However, the reality is that majority of people use it and it is often easier for me to live with this than to convert the sorounding souls. Additionally I am find ing out lately that majority of my favourite open...

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smoothScatter in base R

October 2, 2009
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smoothScatter in base R

smoothScatter function is now available also in base R - in the recommended package graphics that is shipped with R. Originally this function was in the genepplotter package from Bioconductor. I really like it since it can nicely plot large datasets. B...

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smoothScatter in base R

October 2, 2009
By
smoothScatter in base R

smoothScatter function is now available also in base R - in the recommended package graphics that is shipped with R. Originally this function was in the genepplotter package from Bioconductor. I really like it since it can nicely plot large datasets. B...

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Fitting lactation curves/functions in R

September 3, 2009
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It is quite some time ago since I wrote a set of lactation curves/functions in R. I put those functions in the animSci package. However, the package is in a mess for quite some time now - I was adding some new functions, but did not have time to finish the job properly. This is also the reason...

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Fitting lactation curves/functions in R

September 3, 2009
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It is quite some time ago since I wrote a set of lactation curves/functions in R. I put those functions in the animSci package. However, the package is in a mess for quite some time now - I was adding some new functions, but did not have time to finish the job properly. This is also the reason...

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Additive vs. dominance two-allele genetic model by DIC

August 7, 2009
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Two-allele model has alleles A1 and A2 and genotypes A1A1, A1A2, and A2A2. This model can be fitted using only additive effect (restricted model) or additve+dominance effect. (full model) The later model has one parameter more than the former. I was using this model lately and got weird DIC results - the full model had less number...

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Additive vs. dominance two-allele genetic model by DIC

August 7, 2009
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Two-allele model has alleles A1 and A2 and genotypes A1A1, A1A2, and A2A2. This model can be fitted using only additive effect (restricted model) or additve+dominance effect. (full model) The later model has one parameter more than the former. I was using this model lately and got weird DIC results - the full model had less number...

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bugsparallel

June 18, 2009
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bugsparallel is a Metrum Institute project to run BUGS (via R2WinBUGS) in parallel - McMC is an application, where parallel runs can be used very efficientlly. Here is the code for one example using bugsparallel.Some usefull links:Rosenthal, Parallel c...

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bugsparallel

June 18, 2009
By

bugsparallel is a Metrum Institute project to run BUGS (via R2WinBUGS) in parallel - McMC is an application, where parallel runs can be used very efficientlly. Here is the code for one example using bugsparallel.Some usefull links:Rosenthal, Parallel c...

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Embeding fonts in figures produced by R

May 27, 2009
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Some publishers insist that we embed (include) the fonts in each figure. Here is a set of links regarding this issue for figures produced by R:http://tolstoy.newcastle.edu.au/R/help/05/01/10779.htmlhttps://stat.ethz.ch/pipermail/r-help/2006-October/114...

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