Posts Tagged ‘ visualization ’

Clustergram: visualization and diagnostics for cluster analysis (R code)

June 15, 2010
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Clustergram: visualization and diagnostics for cluster analysis (R code)

About Clustergrams In 2002, Matthias Schonlau published in “The Stata Journal” an article named “The Clustergram: A graph for visualizing hierarchical and . As explained in the abstract: In hierarchical cluster analysis dendrogram graphs are used to visualize how clusters are formed. I propose an alternative graph named “clustergram” to examine how cluster members are assigned to clusters as...

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Canadian CPI: Visualization Brainstorm

May 27, 2010
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After finishing the R prototype for data visualization, I've started abstracting the various methods necessary to create beautiful graphs. While there's no preliminary version of the R package yet, I think I've taken a number of exciting steps. These include: Abstracting graph objects. Objects such as lines, scatter plots, and other graph types can all

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Prototype: Web-Friendly Visualizations in R

May 18, 2010
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Developing web-friendly data visualizations is not very difficult, though as far as I know, a package that allows one to do this directly in R does not exist (e-mail me if you know of one). As someone who has been developing lots of data-oriented software tools, it's always nice to post visualizations online. To facilitate

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The new GUI for ggplot2 (using Deducer) – the designer wants your opinion

May 1, 2010
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After discovering that R is expected (this summer) to have a GUI for ggplot2 (through deducer), I later found Ian’s gsoc proposal for this GUI.  Since the system is in it’s early stages of development, Ian has invited people to give comments, input and critique on his plans for the project. For your convenience (and with Ian’s permission), I...

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Jeroen Ooms’s ggplot2 web interface – a new version released (V0.2)

April 12, 2010
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Good news. Jeroen Ooms released a new version of his (amazing) online ggplot2 web interface: yeroon.net/ggplot2 is a web interface for Hadley Wickham’s R package ggplot2. It is used as a tool for rapid prototyping, exploratory graphical analysis and education of statistics and R. The interface is written completely in javascript, therefore there is no need to install anything on the...

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Correlation scatter-plot matrix for ordered-categorical data

April 7, 2010
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Correlation scatter-plot matrix for ordered-categorical data

When analyzing a questionnaire, one often wants to view the correlation between two or more Likert questionnaire item’s (for example: two ordered categorical vectors ranging from 1 to 5). When dealing with several such Likert variable’s, a clear presentation of all the pairwise relation’s between our variable can be achieved by inspecting the (Spearman) correlation matrix (easily achieved in R...

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R-Node: a web front-end to R with Protovis

April 3, 2010
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R-Node: a web front-end to R with Protovis

Update (April 6 – 2010) : R-Node now has it’s own a website, with a dedicated google group (you can join it here) * * * * The integration of R into online web services is (for me) one of the more exciting prospects in R’s future. That is way I was very excited coming across Jamie...

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How Misinformed are Tea Party Protesters About Tax Policy?

March 25, 2010
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How Misinformed are Tea Party Protesters About Tax Policy?

For those of you used to reading about international relations, I apologize for the following brief foray into American politics. It appears that the American Enterprise Institute and David Frum have decided to (abruptly) part ways. Before David left, however, he and his team of interns provided some interesting statistical insight into the

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Video: ggplot2 Creator Hadley Wickham’s Short Course on Data Visualization Using R

March 23, 2010
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Hadley Wickham, creator of ggplot2, has posted a 2 hour video on data visualization using R. You can find links to the videos and slides over at Revolutions Blog. Check back here soon. I am working with Hadley to arrange a day-long ggplot2 short cours...

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Create annotated GWAS manhattan plots using ggplot2 in R

March 18, 2010
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A few months ago I showed you in this post how to use some code I wrote to produce manhattan plots in R using ggplot2. The qqman() function I described in the previous post actually calls another function, manhattan(), which has a few options you can s...

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