624 search results for "knitr"

knitr: nice alternative for Sweave

December 17, 2011
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I recently discovered knitr for dynamic report generation in R. It seems like a very powerful alternative to Sweave. Particularly, I am interested in png graphic device support (it supports more than 20 graphic devices) and R code formatting.Check it o...

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knitr: Elegant, flexible and fast dynamic report generation with R

December 1, 2011
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The world has changed. You can feel it on GitHub. You can smell it on Google+. The knitr package, as an alternative tool to Sweave, has features that you have been longing for, and features that you might have never imagined. Thumb through the PDF manu...

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Analysis of the #7FavPackages hashtag

August 26, 2016
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Analysis of the #7FavPackages hashtag

Twitter has seen a recent trend of “first 7” and “favorite 7” hashtags, like #7FirstJobs and #7FavFilms. Last week I added one to the mix, about my 7 favorite R packages: devtoolsdplyrggplot2knitrRcpprmarkdownshiny#7FavPackages #rstats— David Robinson (@drob) August 16, 2016 Hadley Wickham agreed to share his own, but on one condition:

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R Markdown: How to format tables and figures in .docx files

August 25, 2016
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R Markdown: How to format tables and figures in .docx files

In research, we usually publish the most important findings in tables and figures. When writing research papers using Rmarkdown (*.Rmd), we have several options to format the output of the final MS Word document (.docx). Tables can be formated using either the knitr package’s kable() function or several functions of the pander package. Figure sizes Related Post

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useR and JSM 2016 conferences: a story in tweets

August 23, 2016
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useR and JSM 2016 conferences: a story in tweets

I was amused by a Guardian article last month that declared “I’m a serious academic, not a professional Instagrammer,” arguing that social media is a distraction for scientific research. This attitude was, to say the least, not popular on academic Twitter, which responded with the #seriousacademic hashtag. When someone tries to claim that a...

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The Olympic Medal Table Visualized Gapminder Style

August 20, 2016
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The Olympic Medal Table Visualized Gapminder Style

This work is licensed under a Creative Commons Attribution-ShareAlike 4.0 International License. The markdown+Rknitr source code of this blog is available under a GNU General Public License (GPL v3) license from . Abstract Following Hans Rosling's Gapminder animation style we visualize the total number of medals a country...

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Introduction to LabKey and R Integration

August 12, 2016
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Introduction to LabKey and R Integration

How and What to deliver are two main themes of my journey to look for an effective way of developing data products. For the former, decent web technologies encompassing HTML, CSS and Javascript are important. Read More ...

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Annotating sets of genomic intervals with genomic annotations such as chromHMM

August 12, 2016
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Annotating sets of genomic intervals with genomic annotations such as chromHMM

Annotating sets of genomic intervals with genomic annotations such as chromHMM Genomation is an R package to summarize, annotate and visualize genomic intervals. It contains a collection of tools for visualizing and analyzing genome-wide data sets, i.e....

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No Sleep During the Reproducibility Session

August 3, 2016
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No Sleep During the Reproducibility Session

This work is licensed under a Creative Commons Attribution-ShareAlike 4.0 International License. The markdown+Rknitr source code of this blog is available under a GNU General Public License (GPL v3) license from . Abstract R code is provided for implementing a statistical method by Nishiura, Miyamatsu, and Mizumoto...

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Finding possible class schedules

August 1, 2016
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Finding possible class schedules

Over the weekend my brother wanted to figure out his class schedule for the next semester. He is a veterinary medicine and zootechnology student at UNAM. For this upcoming semester there is a set of classes he has to take and each has 8 or so instructo...

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