Posts Tagged ‘ LaTex ’

reproducible documents/analytics in R: the knitr package

June 26, 2012
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reproducible documents/analytics in R: the knitr package

When I am working in new institutions and I am asking: “Do you have a document management system?” I often get the answer:”Yap, we are using folders” … OKAY. Making analysis, developing applications and keeping an eye on code, data and applications make this even harder as it has to be. Of course not many

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\verbatim [beamer package]

June 11, 2012
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\verbatim [beamer package]

Once again working on my slides for the AMSI Lecture 2012 tour, it took me a while to get the following LaTeX code (about the family reunion puzzle) to work: \begin{frame} \slidetitle{A family meeting} \begin{block}{Random switch of couples} \only<1>{ \begin{itemize} \item Pick two couples at random with probabilities proportional to the

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knitr Performance Report 4

June 8, 2012
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knitr Performance Report 4

please see knitR Performance Report 3 (really with knitr) and dprint, knitr Performance Report–Attempt 3, knitr Performance Report-Attempt 2 and knitr Performance Report-Attempt 1 Here is another iteration of the ongoing performance reporting attempt...

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\STATE [algorithmic package]

June 7, 2012
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\STATE [algorithmic package]

I fought with my LαTεX compiler this morning as it did not want to deal with my code: looking on forums for incompatibilities between beamer and algorithmic, and adding all kinds of packages, to no avail. Until I realised one \STATE was missing: (This is connected with my AMSI public lecture on simulation, obviously!) Filed

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knitR Performance Report 3 (really with knitr) and dprint

May 23, 2012
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knitR Performance Report 3 (really with knitr) and dprint

please see knitr Performance Report–Attempt 3, knitr Performance Report-Attempt 2 and knitr Performance Report-Attempt 1 alstated’s asked a very good question in his comment on knitr Performance Report–Attempt 3, and I’m not sure I could have a...

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knitr Performance Report–Attempt 3

May 22, 2012
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knitr Performance Report–Attempt 3

please see knitr Performance Report-Attempt 2 and knitr Performance Report-Attempt 1 Since the time of my last reporting post, RStudio, knitr, and Sweave have worked extremely hard to make document creation easier by becoming even more streamlined and ...

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Blog aggregators

May 15, 2012
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A very useful way of keeping up with blogs in a particular area is to subscribe to a blog aggregator. These will syndicate posts from a large number of blogs and provide links back to the original sources. So you only need to subscribe once to get all the good stuff in that area. There are now several blog...

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what’s wrong with package comment?!

May 3, 2012
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what’s wrong with package comment?!

I spent most of the Sunday afternoon trying to understand why defining did not have the same effect as writing the line until I found there is a clash due to the comment package… The assuredly simple code produces an error message: This is quite an inconvenience as I need to compile my solution manual

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R Workshop: Reproducible Research using Sweave for Beginers

April 27, 2012
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R Workshop: Reproducible Research using Sweave for Beginers

Monday, April 30, 2012  14h-16h. Stewart Biology Rm w6/12 (Montreal) guRu: Denis Haine (Université de Montréal) Topics Reproducible research was first coined by Pr. Jon Claerbout, professor of geophysics at Stanford University, to describe that the results from researches can be replicated by other scientists by making available data, procedures, materials and the computational environment

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knitr Performance Report-Attempt 2

April 18, 2012
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knitr Performance Report-Attempt 2

Over the years I have changed my learning process from reading thoroughly first before proceeding to reading minimally and then applying immediately.  I very quickly see the gaps in my knowledge.  This method is far more painful but seems to ...

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