Posts Tagged ‘ api ’

Facebook Graph API Explorer with R

November 10, 2011
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Facebook Graph API Explorer with R

I wanted to play around with the Facebook Graph API  using the Graph API Explorer page as a coding exercise. This facility allows one to use the API with a temporary authorisation token. Now, I don’t know how to make an R package for the proper API where you have to register for an API key and

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My little presentation on getting web data through R

October 28, 2011
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My little presentation on getting web data through R

With examples from rOpenSci R packages. p.s. I am no expert at this...Web data from R View more presentations from schamber

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rnpn: An R interface for the National Phenology Network

August 31, 2011
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rnpn: An R interface for the National Phenology Network

The team at rOpenSci and I have been working on a wrapper for the USA National Phenology Network API. The following is a demo of some of the current possibilities. We will have more functions down the road. Get the publicly available code, and contribu...

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(#ESA11) rOpenSci: a collaborative effort to develop R-based tools for facilitating Open Science

August 8, 2011
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(#ESA11) rOpenSci: a collaborative effort to develop R-based tools for facilitating Open Science

Our development team would like to announce the launch of rOpenSci. As the title states, this project aims to create R packages to make open science more available to researchers. http://ropensci.org/ What this means is t...

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rbold: An R Interface for Bold Systems barcode repository

June 28, 2011
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rbold: An R Interface for Bold Systems barcode repository

Have you ever wanted to search and fetch barcode data from Bold Systems?I am developing functions to interface with Bold from R. I just started, but hopefully folks will find it useful.The code is at Github here. The two functions are still very buggy,...

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PLoS journals API from R: "rplos"

June 21, 2011
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PLoS journals API from R: "rplos"

The Public Libraries of Science (PLOS) has an API so that developers can create cool tools to access their data (including full text papers!!).Carl Boettiger at UC Davis and I are working on R functions that use the PLoS API. See our code on Githu...

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Example 8.35: Grab true (not pseudo) random numbers; passing API URLs to functions or macros

April 19, 2011
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Example 8.35: Grab true (not pseudo) random numbers; passing API URLs to functions or macros

Usually, we're content to use a pseudo-random number generator. But sometimes we may want numbers that are actually random-- an example might be for randomizing treatment status in a randomized controlled trial.The site Random.org provides truly rando...

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Analysing the ISMB 2010 meeting using R

July 20, 2010
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Analysing the ISMB 2010 meeting using R

The colossus of bioinformatics meetings, ISMB, convened in Boston this year from July 9 – 13. As in recent years, the meeting was covered online at its website, FriendFeed and Twitter. I thought it would be fun to run a quick analysis of activity at the FriendFeed room using R. 1. Fetch the data We

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Eight R Video Tutorials on VCASMO

February 4, 2010
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Download "Getting Started with the Social Media Analytics Research Toolkit" (pdf, 1.25 megabytes) Download the Social Media Analytics Research Toolkit Thanks to Drew Conway (@drewconway), a PhD student at New York University, there are now eight excell...

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APIs: I wish the life sciences would learn from social networks

December 10, 2009
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APIs: I wish the life sciences would learn from social networks

I was prompted by a thread on the apparent decline of FriendFeed to look for evidence of declining participation in my networks. First, a quick and dirty Ruby script, tls.rb to grab the Life Scientists feed and count the likes and comments: #!/usr/bin/ruby require 'rubygems' require 'json/pure' require 'net/http' require 'open-uri' def format_date(d) if d

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