2451 search results for "twitteR"

Monster functions (Raaargh!)

August 12, 2011
By
Monster functions (Raaargh!)

It’s widely considered good programming practice to have lots of little functions rather than a few big functions. The reasons behind this are simple. When your program breaks, it’s much nicer to debug a five line function than a five hundred line function. Additionally, by breaking up your code into little chunks, you often find

Read more »

In case you missed it: July Roundup

August 10, 2011
By

In case you missed them, here are some articles from July of particular interest to R users. A simulation in R finds the value (or disadvantage) or drawing an X, J, Q or Z in Scrabble. How to display high-quality graphics on the web using SVG output from R. A review of Paul Murrell's talk about raster image support...

Read more »

Bayes factors and martingales

August 10, 2011
By
Bayes factors and martingales

A surprising paper came out in the last issue of Statistical Science, linking martingales and Bayes factors. In the historical part, the authors (Shafer, Shen, Vereshchagin and Vovk) recall that martingales were popularised by Martin-Löf, who is also influential in the theory of algorithmic randomness. A property of test martingales (i.e., martingales that are non

Read more »

SNA: Visualising an email box with R

August 10, 2011
By
SNA: Visualising an email box with R

Are statistics sexy? Visualising social networks certainly is! I wrote a little function, which makes producing beautiful plots depicting a mailbox with R an extremely easy task. I find visualisations of ‘social graphs’ particularly appealing. They look like flowers. I … Continue reading →

Read more »

Power of running world records

August 8, 2011
By
Power of running world records

Followinga few entries on sports here and there, I was wondering what kind of law follow the running records with respect to the distance. The data are available on Wikipedia, or here for a tidied version. It collects 18 distances, from 100 meters to 100 kilometers. A log-log scale is in order: It is nice

Read more »

(#ESA11) rOpenSci: a collaborative effort to develop R-based tools for facilitating Open Science

August 8, 2011
By
(#ESA11) rOpenSci: a collaborative effort to develop R-based tools for facilitating Open Science

Our development team would like to announce the launch of rOpenSci. As the title states, this project aims to create R packages to make open science more available to researchers. http://ropensci.org/ What this means is t...

Read more »

RghcnV3 2.0

August 7, 2011
By
RghcnV3 2.0

Well, version 2.0 is in the can and I’ll be uploading to CRAN over the next couple of days. Lets go over the highlights. Prior to version 2.0 we had basically 3 kinds of data flowing around the package: V3 14 column format, zoo objects and mts objects.  The 14 column format has always been

Read more »

Number of components in a mixture

August 5, 2011
By
Number of components in a mixture

I got a paper (unavailable online) to referee about testing for the order (i.e. the number of components) of a normal mixture. Although this is an easily spelled problem, namely estimate k in I came to the conclusion that it is a kind of ill-posed problem. Without a clear definition of what a component is,

Read more »

Positive coefficient regression in R

August 5, 2011
By
Positive coefficient regression in R

Ever have a regression model where the coefficients don't make sense? I've been trying to predict electricity and gas consumption from daily activity schedules but a simple linear regression kept saying that demands should go down the more an activity is performed. Fortunately I found the nnls package and show here how you can use it to...

Read more »

Friday Links: R, OpenHelix Bioinformatics Tips, 23andMe, Perl, Python, Next-Gen Sequencing

August 5, 2011
By
Friday Links: R, OpenHelix Bioinformatics Tips, 23andMe, Perl, Python, Next-Gen Sequencing

I haven't posted much here recently, but here is a roundup of a few of the links I've shared on Twitter (@genetics_blog) over the last two weeks.Here is a nice tutorial on accessing high-throughput public data (from NCBI) using R and Bioconductor.Cloud...

Read more »