1415 search results for "regression"

sab-R-metrics: Subsetting, Conditional Statements, ‘tapply()’, and VERY simple ‘for loops’

January 11, 2011
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In my last sab-R-metrics post, I went over some basics of calling data and creating vectors or new data from those. Here, I want to extend that to full subsets of data and go on to use some of the basic functions in R so that we can begin plotting in the next tutorial.Before I begin, I...

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sab-R-metrics: Subsetting, Conditional Statements, ‘tapply()’, and VERY simple ‘for loops’

January 11, 2011
By

In my last sab-R-metrics post, I went over some basics of calling data and creating vectors or new data from those. Here, I want to extend that to full subsets of data and go on to use some of the basic functions in R so that we can begin plotting in the next tutorial.Before I begin, I...

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R function for extracting F-test P-value from linear model object

January 10, 2011
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I thought it would be trivial to extract the p-value on the F-test of a linear regression model (testing the null hypothesis R²=0). If I fit the linear model: fit<-lm(y~x1+x2), I can't seem to find it in names(fit) or summary(fit). But summary(fit)$fstatistic does give you the F statistic, and both degrees of freedom, so I wrote this function to...

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Using R for Introductory Statistics, Chapter 4, Model Formulae

January 10, 2011
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Using R for Introductory Statistics, Chapter 4, Model Formulae

Several R functions take model formulae as parameters. Model formulae are symbolic expressions. They define a relationship between variables rather than an arithmetic expression to be evaluated immediately. Model formulae are defined with the tilde ope...

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Using R for Introductory Statistics, Chapter 4, Model Formulae

January 10, 2011
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Using R for Introductory Statistics, Chapter 4, Model Formulae

Several R functions take model formulae as parameters. Model formulae are symbolic expressions. They define a relationship between variables rather than an arithmetic expression to be evaluated immediately. Model formulae are defined with the tilde ope...

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sab-R-metrics: Introduction to R

January 5, 2011
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sab-R-metrics: Introduction to R

In a recent post, I briefly mentioned that I may turn a majority of the focus of this blog to teaching R commands for use with sabermetric analysis. Only a few days later, Ricky Zanker began a new column at The Hardball Times doing just that. But that's okay. Hopefully both his and mine...

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sab-R-metrics: Introduction to R

January 5, 2011
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sab-R-metrics: Introduction to R

In a recent post, I briefly mentioned that I may turn a majority of the focus of this blog to teaching R commands for use with sabermetric analysis. Only a few days later, Ricky Zanker began a new column at The Hardball Times doing just that. But that's okay. Hopefully both his and mine...

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Review: Statistical Analysis with R: Beginner’s Guide by John M. Quick

January 1, 2011
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Review: Statistical Analysis with R: Beginner’s Guide by John M. Quick

Summary: If you can get past the strange underlying story, then this gives a good introduction to R to someone with no programming experience. However, if you have any experience with other programming languages then another book is likely to be more suitable. Reference: Quick, J. M., Statistical Analysis in R: Beginners Guide, Packt Publishing,

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The R Journal, Vol.2 Issue 2 is out

December 31, 2010
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The second issue of the second volume of The R Journal is now available . Download complete issue Refereed articles may be downloaded individually using the links below. Table of Contents Editorial 3 Contributed Research Articles Solving Differential Equations in R Karline Soetaert, Thomas Petzoldt and R. Woodrow Setzer 5 Source

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Chromosome bias in R, my notebook

December 23, 2010
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Chromosome bias in R, my notebook

My goal is to develop a means of detecting chromosome bias from a human BAM file.Because I've been working with proprietary and novel plant genomes for the last three years, I haven't had the chance to use any of the awesome UCSC-based annotational features that have been introduced and refined in Bioconductor until now. I've returned to biomedical research...

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