2719 search results for "gis"

[R][ggplot2][R-bloggers]RcmdrPlugin.KMggplot2_0.0-3 is on CRAN now

July 28, 2011
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[R][ggplot2][R-bloggers]RcmdrPlugin.KMggplot2_0.0-3 is on CRAN now

RcmdrPlugin.KMggplot2 (CRAN) I posted an Rcmdr plug-in for a ”ggplot2” GUI front-end on CRAN. This version supports Kaplan-Meier plot and other plots as follow: Kaplan-Meier plot Show no. at risk on inside Show no. at risk table on outside Histogram Colo

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Challenge alert — material identification

July 28, 2011
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Challenge alert — material identification

We start yet another series of post — challenge alerts. This series is intended to share news about machine learning or data mining challenges which may be interesting to the members of our community, possibly with some brief introduction to the problem. So if you hear about some contest, notify us on Skewed distribution. Today

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Analysis of ISMB coverage at FriendFeed: 2008 – 2011

July 27, 2011
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Analysis of ISMB coverage at FriendFeed: 2008 – 2011

ISMB/ECCB 2011 was held between July 15-19 this year and as in previous years, FriendFeed was used to cover the meeting. Last year, I wrote a post about how to use R to analyse the coverage. I was planning something similar for 2011 when I thought: we have 4 years of ISMB at FriendFeed now

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Word Cloud in R

July 27, 2011
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Word Cloud in R

A word cloud (or tag cloud) can be an handy tool when you need to highlight the most commonly cited words in a text using a quick visualization. Of course, you can use one of the several on-line services, such as wordle or tagxedo ,...

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Two-way CRAN

July 26, 2011
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Two-way CRAN

Sooner on later, every useR will manage to exhaust R’s built-in capabilities and land on CRAN looking for his dreamed needle in a haystack of 3k+ contributed packages. Probably most of you already know stuff like Task Views or rseek which make finding something relevant a bit easier than digging the full list or googling, however all methods

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Parallel JAGS RNGs

July 23, 2011
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As a matter of convention, we usually run 3 or 4 chains in JAGS. By default, this gives rise to chains that draw samples from 3 or 4 distinct pseudorandom number generators. I didn’t go and check whether it does things 111,222,333 or 123,123,123, but in any event the “parallel chains” in JAGS are samples

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Clustering U.S. Senators using roll call voting data

July 22, 2011
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Clustering U.S. Senators  using roll call voting data

For our forthcoming book on machine learning for hackers, John Myles White and I will discuss clustering, and various methods for doing so. One common method for clustering observations

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Parallel random forests using foreach

July 22, 2011
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Parallel random forests using foreach

There's been some discussion on the kaggle forums and on a few blogs about various ways to parallelize random forests, so I thought I'd add my thoughts on the issue.Here's my version of the 'parRF' function, which is based on the elegant version in the...

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Avoiding Loops in R: An Example with Principal Minors

July 18, 2011
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Avoiding Loops in R: An Example with Principal Minors

Yesterday, I found myself wanting to compute a large subset of the second order principal minors of a matrix (diagonal-preserving minors; the ones for which the rows and columns kept are the same). Don't judge me for wanting to do this, and bear with ...

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Correlation Resources: SPSS, R, Causality, Interpretation, and APA Style Reporting

July 17, 2011
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This post provides links to a range of resources related to the use and interpretation of correlations. I wanted to provide a page with links to a number of additional resources that would be useful both for those of my students who might be keen to le...

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