MYTHS AND TRUTHS ABOUT AN OFTEN-USED, LITTLE-UNDERSTOOD STATISTICAL PROCEDURE If you go to a consumer research conference, you will hear tales of how experiments have undergone particular statistical rites: the attainment of the elusive crossover interaction, the demonstration of full mediation through Baron and Kenny’s sacred procedure, and so on. DSN has nothing against any
Part of what attracted me to R was the ease and efficiency in using the language for tasks for which it was designed. R is a tool among that can be used to do great things with minimal effort. This post illustrates some other tools and tech...
There are a lot of great references on the web on how to levarage LaTeX for reporting and presentations (beamer), but as someone who is completely new to R and reproducible research, I was having a pretty hard time figuring out simply what to do (what tools, where do you edit, etc.). Eclipse as a 
The LaTeX beamer package can be used to create appealing presentations for many applications. A working knowledge of LaTeX is required but once the initial learning curve and transition is made from a visual word processor to a markup based approach the benefits are worth the initial investment of time. Title Pages In a previous post we
The 2010 Workshop on Algorithms for Modern Massive Data Sets (MMDS 2010) finished up this past Friday (June 18th) at Stanford. This was an exceptionally well organized conference: four days of mind-stretching talks on algorithm development and the challenges of working with massive data sets approached from almost every conceivable angle. The approximately 100 attendees were a diverse group...
I had to dig deep to find posts on QSAR modeling. There are quite a few on QSAR in Bioclipse, but that focuses on the descriptor calculation. In a quick scan, I could only spot two modeling posts:The CDK/Metabolomics/Chemometrics Unconference resultsWh...
useR!2010 is coming. I am going to give two talks there (I will write more of that soon), but in the meantime, please note that the online registration deadline is coming to an end. This was published on the R-help mailing list today: ————- The final registration deadline for the R User Conference is June 20, 2010, one week...
As promised a few posts ago, another demonstration of the excellent biomaRt package, this time in conjunction with GenomeGraphs. Here’s what we’re going to do: Grab some public microarray data Normalise and get a list of the most differentially-expressed probesets Use biomaRt to fetch the genes associated with those probesets Plot the data using GenomeGraphs 
PROS ARE NOT GETTING BETTER AT FREE THROWS Rick Larrick recently told Decision Science News that baseball players have been getting better over the years in a couple ways. First, home runs and strikeouts have increased. The careless or clueless reader might note that this is curious, for from the batter’s perspective home runs are
I want to share my experience in generating the data for social network analysis using R and analyzing it using Gephi... WHICH DATA STRUCTURE TO USE FOR LARGE GRAPHS?I quickly realized that using edge lists and adjacency matrix gets difficult as the g...
Zero Inflated Models and Generalized Linear Mixed Models with R.
Zuur, Saveliev, Ieno (2012).
