358 search results for "sweave"

How to Become an Efficient and Collaborative R Programmer

December 12, 2011
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I may want to add a subtitle "Why R-Forge Must Die" (thinking of Barry Rowlingson's talk earlier this year). I have been a GitHub user for two years, and I was mainly influenced by Hadley. Now I even feel a little bit addicted to GitHub (its slogan is ...

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Introducing Biostatistics to first year LCG students

December 4, 2011
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Introducing Biostatistics to first year LCG students

Around two weeks ago I gave a talk via skype to the first year students from the Undergraduate Program on Genomic Sciences (LCG in Spanish) from the National Autonomous University of Mexico (UNAM in Spanish). The talk was under the context of the Introduction to Bioinformatics Seminar Series whose goal is to familiarize the new students with the bioinformatics...

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knitr: Elegant, flexible and fast dynamic report generation with R

December 1, 2011
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The world has changed. You can feel it on GitHub. You can smell it on Google+. The knitr package, as an alternative tool to Sweave, has features that you have been longing for, and features that you might have never imagined. Thumb through the PDF manu...

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knitr: Elegant, flexible and fast dynamic report generation with R

December 1, 2011
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The world has changed. You can feel it on GitHub. You can smell it on Google+. For those who have been struggling with Sweave, here comes the knitr package. It has features that you have been longing for, and features that you might have never imagined. Thumb through the PDF manual to see some of

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Materials of the “LaTeX for Psychological Researchers” course

November 23, 2011
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I have given a course on using LaTeX for psychological researchers. This course consisted of four lectures in which I discussed the following subjects: how to obtain a LaTeX distribution How to use LaTeX to write professional scientific reports How to use … Continue reading →

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The Joy of R: A Feline Guide

November 5, 2011
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The Joy of R: A Feline Guide

Just because it’s caturday Images by Mario Pineda-Krch (CC BY-NC-SA 3.0) This is from the “Mario’s Entangled Bank” blog ( http://pineda-krch.com ) of Mario Pineda-Krch, a theoretical biologist at the University of Alberta. Filed under: cats, computing, humour, R, Sweave

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Data Referenced Journalism and the Media – Still a Long Way to Go Yet?

November 4, 2011
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Data Referenced Journalism and the Media – Still a Long Way to Go Yet?

Reading our local weekly press this evening (the Isle of Wight County Press), I noticed a page 5 headline declaring “Alarm over death rates at St Mary’s”, St Mary’s being the local general hospital. It seems a Department of Health report on hospital mortality rates came out earlier this week, and the Island’s hospital, it

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"Applications of R" contest submissions online

November 2, 2011
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Thanks to everyone for participating in the "Applications of R in Business" contest. R users submitted more than 25 entries, describing how R is used in industries including life sciences, finance, manufacturing, sentiment analysis, and even sports. Some entries are just outlines for now (competitors have until November 30 to finalize their entries), but already there are some quite...

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Cycles in finite populations: A reproducible seminar in three acts

November 1, 2011
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Cycles in finite populations: A reproducible seminar in three acts

For this years Halloween I presented the mathematical biology seminar at the Centre for Mathematical Biology. Here is the title and the abstract… Cycles in finite populations: a reproducible seminar in three acts Many natural populations exhibit cyclic fluctuations. Explaining the underlying … Continue reading →

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Software for Research, Part 3: [R], RStudio and ggplot2 for Statistics

October 17, 2011
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Software for Research, Part 3: [R], RStudio and ggplot2 for Statistics

is an excellent open-source statistics language. It's cross-platform and free and I think it will eventually displace proprietary stat's packages due to its rapid development, speed and ease of use. So there's no time like the present to get used...

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