2214 search results for "map"

It Takes 2 Lines of R Code to Discover Interesting Biology

October 23, 2012
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It Takes 2 Lines of R Code to Discover Interesting Biology

The following biological phenomenon demonstrates just how elegant R code can be. In vertebrate genomes, a methyl group (-CH3) can be added to nucleotides. Such process of methylation is commonly associated with gene suppression. Most of the cytosines in the … Continue reading →

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googleVis 0.3.0/0.3.1 is released: It’s faster!

October 23, 2012
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googleVis 0.3.0/0.3.1 is released: It’s faster!

Version 0.3.0 of the googleVis package for R has been released on CRAN on 20 October 2012. With this version we have been able to speed up the code considerably. The transformation of R data frames into JSON works significantly faster. The execution of the gvisMotionChart function in the World Bank demo is over 35 times...

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ChIP-seq Analysis with Bioconductor

October 22, 2012
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ChIP-seq Analysis with Bioconductor

Often scientists are interested in finding genome-wide binding site of their protein of interest. R offers easy way to load and process the sequence files coming from ChIP-seq experiment. During the next weeks I’m going to present a pipeline that … Continue reading →

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Basics of JavaScript and D3 for R Users

October 21, 2012
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Basics of JavaScript and D3 for R Users

Hadley Wickham, creator of the ggplot2 R package, has been learning JavaScript and its D3 library for the next iteration of ggplot2 (tentatively titled r2d3?)… so I suspect it’s only a matter of time before he pulls the rest of the … Continue reading →

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Because it’s Friday: 7 billion-person ‘continents’

October 19, 2012
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Because it’s Friday: 7 billion-person ‘continents’

The population of the world has been over 7 billion for about a year now. But those seven billion aren't distributed equally around the globe. 1.2 billion people — about in India alone (despite it havingjust 2% of the world's land area). At the other end of the spectrum, the entire continent of Australia houses about 0.3% of Australia....

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Venturing in text mining with ‘R’

October 19, 2012
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Background:Hello Friends, hope all of you are doing just great.  I decided to create my footprint in the blog space, it comes from my desire to share few very basic steps of text mining, with all of you.  I am neither a nerd, or statistician or an established data scientist and if you are one of them well,...

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Vendor news: TIBCO’s proprietary R runtime; Teradata’s appliance integrates R

October 17, 2012
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Vendor news: TIBCO’s proprietary R runtime; Teradata’s appliance integrates R

In a webinar today previewing Spotfire 5 (scheduled for release this November), TIBCO announced that it will include TERR: The Tibco Enterprise Runtime for R. TERR is a closed-source reimplementation of the R language engine, and not based on the GPL-licensed R project from the R Foundation. Here's the relevant slide from the webinar: By making the TERR engine...

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Rename photos’ names according to shooting time in a batch mode.

October 17, 2012
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For some reason, you want to know the shooting time of your photos. Generally, shooting time can be found as Date modified, if you didn’t made a lot of change to your photos. But, we often make change to our photos, such like copy them from a place to another, edit using Photoshop, Picasa, etc., and then, the Date...

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Twitter Analysis of the US Presidential Debate

October 17, 2012
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Twitter Analysis of the US Presidential Debate

The following are word clouds of tweets for each candidate from the October 16, 2012 debate with the bigger words the more often they were used in tweets (click on each word cloud to enlarge): And the net-negative posts for each candidate: Please note that the bigger the word is in the word cloud the

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The Shape of Floating Point Random Numbers

October 15, 2012
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The Shape of Floating Point Random Numbers

Over the weekend, Viral Shah updated Julia’s implementation of randn() to give a 20% speed boost. Because we all wanted to test that this speed-up had not come at the expense of the validity of Julia’s RNG system, I spent some time this

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