Making Back-to-Back Histograms

June 10, 2014
By

(This article was first published on A HopStat and Jump Away » Rbloggers, and kindly contributed to R-bloggers)

A colleage of mine asked me how to do back to back histograms (instead of on top of each other). I feel as though there should be a function like voilin plot from the vioplot package. Voilin plots are good for displaying data, but the violin must have the left and right (or top and bottom) of the violin to be from the same distribution, and therefore are symmetrical. Many times people want to compare two distributions.

Cookbook for R ) shows how to overlay histograms (or densities) on top of each other, so go there if that's what you want. (NB: that is the way I tend to compare distributions, especially more than 2. I provide the code below because some have different preferences.)

ggplot implementation:

library(ggplot2)
df = data.frame(x = rnorm(100), x2 = rnorm(100, mean=2))

g = ggplot(df, aes(x)) + geom_histogram( aes(x = x, y = ..density..),
                                             binwidth = diff(range(df$x))/30, fill="blue") + 
  geom_histogram( aes(x = x2, y = -..density..), binwidth = diff(range(df$x))/30, fill= "green")
print(g)
## Warning: Stacking not well defined when ymin != 0

plot of chunk unnamed-chunk-1

I simply simulated 2 normal distributions of 100 points and then plotted them. Not the ..density call in the aes for the histograms. This just scales the histogram to a density and not a count. The -..density.. flips the second histogram around zero so that they are back-to-back. We see that ggplot doesn't like stacking when you have negative data, but it's ok for this exmaple and don't overlap.

print(g + coord_flip())
## Warning: Stacking not well defined when ymin != 0

plot of chunk unnamed-chunk-2

Using coord_flip plots back-to-back histograms horizontally. This code can easily be extended using geom_density and actually a volcano plot version is in the help for stat_density.

Base implementation

Not everyone likes ggplot2 so I figured I would provide in implementation in base graphics.

## using base
h1 = hist(df$x, plot=FALSE)
h2 = hist(df$x2, plot=FALSE)
h2$counts = - h2$counts
hmax = max(h1$counts)
hmin = min(h2$counts)
X = c(h1$breaks, h2$breaks)
xmax = max(X)
xmin = min(X)
plot(h1, ylim=c(hmin, hmax), col="green", xlim=c(xmin, xmax))
lines(h2, col="blue")

plot of chunk unnamed-chunk-3

The code calculates the histograms for each distribution and stores the information. I simply take the negative number of counts to flip the histogram over the x-axis.

Go forth and prosper

You can adjust the axes to positive numbers, make more implementations with densities/etc, but this is a simple graphic I've seen people use. Hope this helps someone out.


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