If you want more info about clustering, I have another post about "Clustering analysis and its implementation in R". Here is the link: http://onetipperday.blogspot.com/2012/04/clustering-analysis-2.html------------Several R functions in this...

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If you want more info about clustering, I have another post about "Clustering analysis and its implementation in R". Here is the link: http://onetipperday.blogspot.com/2012/04/clustering-analysis-2.html------------Several R functions in this...

The main message is to use "match" to get index of needed rows and then get the rows by the index, instead of using the row names to select, which is much slower. Here is example:In example above, we know that the same values of column 2nd have same values of columns from 4th to the end. So, instead...

NuPoP Nucleosome positioning predictionMulcom Differential expression and false discovery rate calculation through multiple comparisonontoCAT Ontology parsingBHC Bayesian Hierarchical ClusteringiSeq Bayesian Hierarchical Modeling of ChIP-seq...