Blog Archives

Building a custom database of country time-series data using Quandl

May 8, 2013
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Building a custom database of country time-series data using Quandl

Encouraged by this post I had another look at quandl for collecting datasets from different agencies. Right now I need to get data for four countries on a couple of dozen indicators. This graphic is just a quick example with only two indicators of what I am aiming to be able to do. The process

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Changing figure options mid-chunk (in a loop) using the pander package.

April 9, 2013
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Changing figure options mid-chunk (in a loop) using the pander package.

I wrote already about changing figure options mid-chunk in reproducible research. This can be important  e.g. if you are looping through a dataset to produce a graphic for each variable but the figure width or height need to depend on properties of the variables, e.g. if you are producing histograms and want the figures to

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knitr: Changing chunk options like fig.height programmatically, mid-chunk

February 22, 2013
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Knitr is a great tool for doing reproducible research. You can produce all kinds of output inside a single knitr chunk, e.g. you can write a loop to produce lots of figures or tables. The only catch is if you want your figures to have differing captions, heights, etc (and usually you do). The standard

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RStudio and TeXworks working great together

December 18, 2012
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Just now writing a reproducible report in R using RStudio on Ubuntu. So the source is a .Rnw file and I am compiling it with knitr. For the narrative part of the report it is a shame that RStudio doesn’t have autocomplete for latex styles, headings etc. But I just realised that it is possible

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Multi-stage sampling together with hierarchical/ mixed effects models: which packages?

November 5, 2012
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Dear R experts, I sent this question to the r-help list but didn’t get much response, probably because it is more of a stats question. But as this blog is syndicated on r-bloggers I thought I would try it again here on this blog. If I am barking up the wrong tree, feel free to

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Horizon plots with ggplot (not)

August 27, 2012
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Horizon plots with ggplot (not)

The Timely Portfolio blog via R-bloggers has recently published some interesting entries about the value of horizon plots for visual comparison of a number of time series. Very nice it looks too. You can read more about them here. The trick to understanding them is to imagine that each row was orginally a line chart

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Heatmap tables with ggplot2, sort-of

August 27, 2012
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Heatmap tables with ggplot2, sort-of

I wrote before about heatmap tables as a better way of producing frequency or other tables, with a solution which works nicely in latex. It is possible to do them much more easily in ggplot2, like this library(Hmisc) library(ggplot2) library(reshape) data(HairEyeColor) P=t(HairEyeColor) Pm=melt(P) ggfluctuation(Pm,type="heatmap")+geom_text(aes(label=Pm$value),colour="white")+ opts(axis.text.x=theme_text(size = 15),axis.text.y=theme_text(size = 15)) Note that ggfluctuation will also take

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Heatmap tables with ggplot2

August 20, 2012
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Heatmap tables with ggplot2

I wrote before about heatmap tables as a better way of producing frequency or other tables, with a solution which works nicely in latex. It is possible to do them much more easily in ggplot2, like this library(Hmisc) library(ggplot2) library(reshape) data(HairEyeColor) P=t(HairEyeColor) Pm=melt(P) ggfluctuation(Pm,type="heatmap")+geom_text(aes(label=Pm$value),colour="white")+ opts(axis.text.x=theme_text(size = 15),axis.text.y=theme_text(size = 15)) Note that ggfluctuation will also take … Continue reading...

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Horizon plots with ggplot2, sort-of

August 19, 2012
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Horizon plots with ggplot2, sort-of

The Timely Portfolio blog via R-bloggers has recently published some interesting entries about the value of horizon plots for visual comparison of a number of time series. Very nice it looks too. You can read more about them here. The trick to understanding them is to imagine that each row was orginally a line chart … Continue reading...

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