# Monthly Archives: July 2011

## Prepping for useR! 2011 – tty connection update

July 22, 2011
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I'm putting together my presentation for useR! 2011 titled "Experimenting with a tty connection for R". Hence, I've updated the tty connection patch to work with R versions 2.13.0 and 2.13.1. And, instead of re-listing the patch files and re-writing instructions on their application, I've devoted a small portion of my Code page for this

## Manhattan plot with simulated data using ggplot2

July 21, 2011
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In an earlier post I discussed how you might approach producing Manhattan plots in R using ggplot2. Several readers had questions about the code samples in the post, and asked if I could post the complete code. I didn't think that would be very helpfu...

## Manhattan plot with simulated data using ggplot2

July 21, 2011
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In an earlier post I discussed how you might approach producing Manhattan plots in R using ggplot2. Several readers had questions about the code samples in the post, and asked if I could post the complete code. I didn’t think … Continue reading

## A Quick Look At Unemployment

July 21, 2011
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Labor market tightness is defined as the vacancies or job openings rate divided by the unemployment rate.  The theory goes that as job openings increase relative to the unemployment rate a tightness is created in that workers get the upper hand in...

## Smoothing temporally correlated data

July 21, 2011
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$Smoothing temporally correlated data$

Something I have been doing a lot of work with recently are time series data, to which I have been fitting additive models to describe trends and other features of the data. When modelling temporally dependent data, we often need … Continue reading

July 21, 2011
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R reminds me a lot of English. It’s easy to get started, but very difficult to master. So for all those times I’ve spent… well, forever… trying to figure out the “R way” of doing something, I’m glad to share these quick wins. My recent R tutorial on mining Twitter for consumer sentiment wouldn’t have

## Showcasing the latest phylogenetic methods: AUTEUR

July 20, 2011
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While high-speed fish feeding videos may be the signature of the lab, dig a bit deeper and you’ll find a wealth of comparative phylogenetic methods sneaking in.  It’s a natural union — expert functional morphology is the key to good comparative methods, just as phylogenies hold the key to untangling the evolutionary origins of that

## Regional differences on what drives CO2 emissions

July 20, 2011
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If you are investigating the change of CO2 emissions, then you might ask: Where do the changes occur? Well here is the answer.

The staircase plots show the contributing factors to CO2 emissions for each continent. `population` refers to population effects, `gdp_pcap` refers to income per capita, `energy_intensity` refers to energy used per dollar added value, and `carbon intensity`...

## Slides for Reproducible Research Talk at Interface 2011

July 20, 2011
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I gave a talk at the Interface Symposium on reproducible research in practice. I went first in the session, so the slides have a bit more background and philosophy. It was a great session; one of Jon Claerbout's colleagues spoke, Sergey Fomel, a founding author of Madagascar; Sorin Mitran from UNC Chapel Hill talked about